RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 WARSP23381 471 aaKnown RBP16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 THOP1P52888 689 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 POF1BQ8WVV4 589 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 NUF2Q9BZD4 464 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 UNKQ9C0B0 810 aaKnown RBP16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 CHST7Q9NS84 486 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 DMAC2Q9NW81 257 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 TRHDEQ9UKU6 1024 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 RASSF10A6NK89 507 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 SLC25A52Q3SY17 297 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 FOXR2Q6PJQ5 311 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 LRRC6Q86X45 466 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 ATP6V1G3Q96LB4 118 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 TLR10Q9BXR5 811 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 BRD8Q9H0E9 1235 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 LHX5Q9H2C1 402 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 R3HDMLQ9H3Y0 253 aa16.09■□□□□ 0.17
PPFIA1-222ENST00000532504 DDX39BQ13838 428 aaKnown RBP16.08■□□□□ 0.17
PPFIA1-222ENST00000532504 NYAP1Q6ZVC0 841 aa16.08■□□□□ 0.17
PPFIA1-222ENST00000532504 CPA6Q8N4T0 437 aa16.08■□□□□ 0.17
PPFIA1-222ENST00000532504 FBXO25Q8TCJ0 367 aa16.08■□□□□ 0.17
PPFIA1-222ENST00000532504 ZNF516Q92618 1163 aa16.08■□□□□ 0.17
PPFIA1-222ENST00000532504 PRDM12Q9H4Q4 367 aa16.08■□□□□ 0.17
PPFIA1-222ENST00000532504 TLR9Q9NR96 1032 aa16.08■□□□□ 0.17
PPFIA1-222ENST00000532504 DUS2Q9NX74 493 aaKnown RBP16.08■□□□□ 0.17
PPFIA1-222ENST00000532504 HMGXB4Q9UGU5 601 aa16.08■□□□□ 0.17
PPFIA1-222ENST00000532504 VNN1O95497 513 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 CYP2A6P11509 494 aaPredicted RBP16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 MARCKSL1P49006 195 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 ZSCAN26Q16670 478 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 PAPD7Q5XG87 772 aaKnown RBP16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 UGT3A1Q6NUS8 523 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 KATNAL2Q8IYT4 538 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 DQX1Q8TE96 717 aaKnown RBP16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 NRDE2Q9H7Z3 1164 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 UTP6Q9NYH9 597 aaKnown RBP16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 TMEM247A6NEH6 219 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 KDM1AO60341 852 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 TTC4O95801 387 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 MGAT1P26572 445 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 FAM187BQ17R55 369 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 TTC31Q49AM3 519 aaPredicted RBP16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 SETMARQ53H47 684 aaPredicted RBP16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 KLHL5Q96PQ7 755 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 PNKPQ96T60 521 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 MARCOQ9UEW3 520 aaPredicted RBP16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 DRG1Q9Y295 367 aaKnown RBP16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 SYNDIG1LA6NDD5 238 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 ZSCAN5DPP0CG00 497 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 MYL2P10916 166 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 GLRBP48167 497 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 ZNF135P52742 658 aaPredicted RBP16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 STRA8Q7Z7C7 330 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 ZNF280BQ86YH2 543 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 SH2D3CQ8N5H7 860 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 RAD9AQ99638 391 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 PCDH9Q9HC56 1237 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 AASDHPPTQ9NRN7 309 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 SENP1Q9P0U3 644 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 TBC1D14Q9P2M4 693 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 DNAJB4Q9UDY4 337 aa16.08■□□□□ 0.16
PPFIA1-222ENST00000532504 BOP1Q14137 746 aaKnown RBP16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 TTC39BQ5VTQ0 682 aaPredicted RBP16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 CDCA2Q69YH5 1023 aaPredicted RBP16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 XYLT1Q86Y38 959 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 LGMNQ99538 433 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 SEMA3CQ99985 751 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 RNF225M0QZC1 329 aaPredicted RBP16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 PIRTP0C851 137 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 ESRRAP11474 423 aaPredicted RBP16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 PTPN7P35236 360 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 DNAJB7Q7Z6W7 309 aaPredicted RBP16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 CXorf40AQ8TE69 158 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 PPWD1Q96BP3 646 aaKnown RBP16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 TBL1YQ9BQ87 522 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 EML4Q9HC35 981 aaKnown RBP16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 ZFP14Q9HCL3 533 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 C1QTNF3-AMACRE9PGA6 284 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 GNGT2O14610 69 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 MMP8P22894 467 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 SESN3P58005 492 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 USP45Q70EL2 814 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 SKA1Q96BD8 255 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 BTN2A3PQ96KV6 586 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 RNF157Q96PX1 679 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 IL23AQ9NPF7 189 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 WDR27A2RRH5 827 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 NFATC1O95644 943 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 C1RP00736 705 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 APODP05090 189 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 CCNB1P14635 433 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 TAS2R40P59535 323 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 CAPRIN1Q14444 709 aaKnown RBP16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 MORF4L2Q15014 288 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 TAF5Q15542 800 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 SLC39A4Q6P5W5 647 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 NCLNQ969V3 563 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 VCXQ9H320 206 aa16.07■□□□□ 0.16
PPFIA1-222ENST00000532504 PGAP2Q9UHJ9 254 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms