RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 CPA5Q8WXQ8 436 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 TCEAL3Q969E4 200 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 PIWIL1Q96J94 861 aaKnown RBP9.4□□□□□ -0.9
CMTM1-210ENST00000528441 ZC3H10Q96K80 434 aaKnown RBP9.4□□□□□ -0.9
CMTM1-210ENST00000528441 HSPA12BQ96MM6 686 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 GABRG3Q99928 467 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 C11orf70Q9BRQ4 267 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 RTKNQ9BST9 563 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 GTPBP2Q9BX10 602 aaKnown RBP9.4□□□□□ -0.9
CMTM1-210ENST00000528441 LHX5Q9H2C1 402 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 ASNSD1Q9NWL6 643 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 KIAA1522Q9P206 1035 aaPredicted RBP9.4□□□□□ -0.9
CMTM1-210ENST00000528441 THAP10Q9P2Z0 257 aaPredicted RBP9.4□□□□□ -0.9
CMTM1-210ENST00000528441 SLC25A13Q9UJS0 675 aa9.4□□□□□ -0.9
CMTM1-210ENST00000528441 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.39□□□□□ -0.91
CMTM1-210ENST00000528441 BCLAF3A2AJT9 711 aaKnown RBP9.39□□□□□ -0.91
CMTM1-210ENST00000528441 ANKRD62A6NC57 917 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 LGALS16A8MUM7 142 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 KCNU1A8MYU2 1149 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 GOLGA6L19H0YKK7 550 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 GDF9O60383 454 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 ZNF806P0C7X5 589 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 GNSP15586 552 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 PDGFRAP16234 1089 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 PTMSP20962 102 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 PRKCHP24723 683 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 NOS2P35228 1153 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 SOX5P35711 763 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 NSFP46459 744 aaKnown RBP9.39□□□□□ -0.91
CMTM1-210ENST00000528441 PITX1P78337 314 aaPredicted RBP9.39□□□□□ -0.91
CMTM1-210ENST00000528441 ZNF33AQ06730 810 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 LMAN2Q12907 356 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 ZNF177Q13360 481 aaPredicted RBP9.39□□□□□ -0.91
CMTM1-210ENST00000528441 ACCSLQ4AC99 568 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 C2CD6Q53TS8 623 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 FAM133BQ5BKY9 247 aaKnown RBP9.39□□□□□ -0.91
CMTM1-210ENST00000528441 TRIM61Q5EBN2 209 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 CDKAL1Q5VV42 579 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 DAB2IPQ5VWQ8 1189 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 NADSYN1Q6IA69 706 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 OLFML1Q6UWY5 402 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 LRRC31Q6UY01 552 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 NOP9Q86U38 636 aaKnown RBP9.39□□□□□ -0.91
CMTM1-210ENST00000528441 CIR1Q86X95 450 aaPredicted RBP9.39□□□□□ -0.91
CMTM1-210ENST00000528441 ZNF677Q86XU0 584 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 ZNF354CQ86Y25 554 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 FAM217AQ8IXS0 508 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 OR2T3Q8NH03 318 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 MRGPRX1Q96LB2 322 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 PRICKLE1Q96MT3 831 aaPredicted RBP9.39□□□□□ -0.91
CMTM1-210ENST00000528441 PPP1R9BQ96SB3 815 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 SELENOOQ9BVL4 669 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 GPR174Q9BXC1 333 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 MUC3BQ9H195 1237 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 WDCPQ9H6R7 721 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 METTL5Q9NRN9 209 aaKnown RBP9.39□□□□□ -0.91
CMTM1-210ENST00000528441 RRN3Q9NYV6 651 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 TMEM63CQ9P1W3 806 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 SUN2Q9UH99 717 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 XPO7Q9UIA9 1087 aaKnown RBP9.39□□□□□ -0.91
CMTM1-210ENST00000528441 VANGL2Q9ULK5 521 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 NCKAP1Q9Y2A7 1128 aa9.39□□□□□ -0.91
CMTM1-210ENST00000528441 EP300Q09472 2414 aaPredicted RBP9.39□□□□□ -0.91
CMTM1-210ENST00000528441 ABCA7Q8IZY2 2146 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 NUP205Q92621 2012 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 IGHV1OR15-9A0A0B4J2B8 117 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 A0A1W2PQF6 199 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 SYCE3A1L190 88 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 FAM47DPA6NHR8 397 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 LSM8O95777 96 aaKnown RBP9.38□□□□□ -0.91
CMTM1-210ENST00000528441 IGLV3-27P01718 113 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 ASLP04424 464 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 FYNP06241 537 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 RHOCP08134 193 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 DLDP09622 509 aaKnown RBP9.38□□□□□ -0.91
CMTM1-210ENST00000528441 CD6P30203 668 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 CSKP41240 450 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 MATKP42679 507 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 PTGER3P43115 390 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 ZNF165P49910 485 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 ATXN1P54253 815 aaKnown RBP9.38□□□□□ -0.91
CMTM1-210ENST00000528441 OXCT1P55809 520 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 ATP11AP98196 1134 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 SFSWAPQ12872 951 aaKnown RBP9.38□□□□□ -0.91
CMTM1-210ENST00000528441 MTA1Q13330 715 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 MAP7D1Q3KQU3 841 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 PITRM1Q5JRX3 1037 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 WDR45BQ5MNZ6 344 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 MPP7Q5T2T1 576 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 TTC39BQ5VTQ0 682 aaPredicted RBP9.38□□□□□ -0.91
CMTM1-210ENST00000528441 TRIM72Q6ZMU5 477 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 MMS22LQ6ZRQ5 1243 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 RBM43Q6ZSC3 357 aaKnown RBP9.38□□□□□ -0.91
CMTM1-210ENST00000528441 BEND5Q7L4P6 421 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 SLC26A9Q7LBE3 791 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 ERMP1Q7Z2K6 904 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 DHX40Q8IX18 779 aaKnown RBP9.38□□□□□ -0.91
CMTM1-210ENST00000528441 HDDC3Q8N4P3 179 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 WDTC1Q8N5D0 677 aa9.38□□□□□ -0.91
CMTM1-210ENST00000528441 WFDC5Q8TCV5 224 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms