RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 RAPGEF5Q92565 580 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 TSC1Q92574 1164 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 PRICKLE1Q96MT3 831 aaPredicted RBP15.82■□□□□ 0.12
LSM1-203ENST00000520755 HAPLN3Q96S86 360 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 DDX50Q9BQ39 737 aaKnown RBP15.82■□□□□ 0.12
LSM1-203ENST00000520755 BBS2Q9BXC9 721 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 SIK2Q9H0K1 926 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 C8orf33Q9H7E9 229 aaPredicted RBP15.82■□□□□ 0.12
LSM1-203ENST00000520755 TMEM51Q9NW97 253 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 PLK2Q9NYY3 685 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 STOML2Q9UJZ1 356 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 JRKLQ9Y4A0 524 aa15.82■□□□□ 0.12
LSM1-203ENST00000520755 BDP1A6H8Y1 2624 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 TMEM221A6NGB7 291 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 M0R296 226 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 STK25O00506 426 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 ZNF500O60304 480 aaPredicted RBP15.81■□□□□ 0.12
LSM1-203ENST00000520755 TECTAO75443 2155 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 KRT1P04264 644 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 CYBBP04839 570 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 KRT7P08729 469 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 TYRP14679 529 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 TACR2P21452 398 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 L1CAMP32004 1257 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 IRAK1P51617 712 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 AMPD2Q01433 879 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 BOLA3Q53S33 107 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 EFHC2Q5JST6 749 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 NAIF1Q69YI7 327 aaPredicted RBP15.81■□□□□ 0.12
LSM1-203ENST00000520755 AADACL2Q6P093 401 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 TXNDC11Q6PKC3 985 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 SYT10Q6XYQ8 523 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 C14orf80Q86SX3 495 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 RALGPS2Q86X27 583 aaPredicted RBP15.81■□□□□ 0.12
LSM1-203ENST00000520755 PSTKQ8IV42 348 aaKnown RBP15.81■□□□□ 0.12
LSM1-203ENST00000520755 LGI2Q8N0V4 545 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 NAT16Q8N8M0 369 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 CHFRQ96EP1 664 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 MSANTD3Q96H12 275 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 SHDQ96IW2 340 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 OSBPL2Q9H1P3 480 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 MFSD1Q9H3U5 465 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 DHX35Q9H5Z1 703 aaKnown RBP15.81■□□□□ 0.12
LSM1-203ENST00000520755 PCDH18Q9HCL0 1135 aa15.81■□□□□ 0.12
LSM1-203ENST00000520755 TTC28Q96AY4 2481 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 F5H5T6 163 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 MAN2B1O00754 1011 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 HOXC11O43248 304 aaPredicted RBP15.8■□□□□ 0.12
LSM1-203ENST00000520755 PDGFBP01127 241 aaPredicted RBP15.8■□□□□ 0.12
LSM1-203ENST00000520755 GLULP15104 373 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 SGSHP51688 502 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 MLLT6P55198 1093 aaPredicted RBP15.8■□□□□ 0.12
LSM1-203ENST00000520755 NRG1Q02297 640 aaPredicted RBP15.8■□□□□ 0.12
LSM1-203ENST00000520755 MTA1Q13330 715 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 DPYSL3Q14195 570 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 PON2Q15165 354 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 RPS6KA1Q15418 735 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 GAB4Q2WGN9 574 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 ARL13BQ3SXY8 428 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 MPPE1Q53F39 396 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 FYB2Q5VWT5 728 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 MFSD7Q6UXD7 560 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 C12orf40Q86WS4 652 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 FLCNQ8NFG4 579 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 FAM3CQ92520 227 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 TMA16Q96EY4 203 aaKnown RBP15.8■□□□□ 0.12
LSM1-203ENST00000520755 PSMB7Q99436 277 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 HERPUD2Q9BSE4 406 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 TBC1D17Q9HA65 648 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 MARK1Q9P0L2 795 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 DNAI1Q9UI46 699 aa15.8■□□□□ 0.12
LSM1-203ENST00000520755 NDRG2Q9UN36 371 aaKnown RBP15.8■□□□□ 0.12
LSM1-203ENST00000520755 TYW5A2RUC4 315 aaKnown RBP15.79■□□□□ 0.12
LSM1-203ENST00000520755 LRRD1A4D1F6 860 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 DLL1O00548 723 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 TBL1XO60907 577 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 LRIG2O94898 1065 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 PYGMP11217 842 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 KDELR1P24390 212 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 IL4RP24394 825 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 HOXC13P31276 330 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 OPRD1P41143 372 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 SLC6A11P48066 632 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 CDH6P55285 790 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 STARD6P59095 220 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 MMRN1Q13201 1228 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 ZNF211Q13398 564 aaPredicted RBP15.79■□□□□ 0.12
LSM1-203ENST00000520755 AUHQ13825 339 aaKnown RBP15.79■□□□□ 0.12
LSM1-203ENST00000520755 UBXN2BQ14CS0 331 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 TAZQ16635 292 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 PPP6R3Q5H9R7 873 aaPredicted RBP15.79■□□□□ 0.12
LSM1-203ENST00000520755 FBXL22Q6P050 247 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 ZNF852Q6ZMS4 543 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 CFAP52Q8N1V2 620 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 HJURPQ8NCD3 748 aaPredicted RBP15.79■□□□□ 0.12
LSM1-203ENST00000520755 EXD1Q8NHP7 514 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 IGSF8Q969P0 613 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 FAF2Q96CS3 445 aa15.79■□□□□ 0.12
LSM1-203ENST00000520755 XPO6Q96QU8 1125 aaKnown RBP15.79■□□□□ 0.12
LSM1-203ENST00000520755 NAPGQ99747 312 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms