RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 AHI1Q8N157 1196 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 VPS52Q8N1B4 723 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CRYBG2Q8N1P7 616 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SCML4Q8N228 414 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PPM1KQ8N3J5 372 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LZTR1Q8N653 840 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MRPL43Q8N983 215 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CMASQ8NFW8 434 aaPredicted RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NEK11Q8NG66 645 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ABHD4Q8TB40 342 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LNX1Q8TBB1 728 aaPredicted RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SLC7A14Q8TBB6 771 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MYCBPAPQ8TBZ2 947 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 HASPINQ8TF76 798 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SYN2Q92777 582 aaPredicted RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NAP1L5Q96NT1 182 aaPredicted RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SPAG5Q96R06 1193 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PKMYT1Q99640 499 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZFYVE21Q9BQ24 234 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TCF25Q9BQ70 676 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RTP3Q9BQQ7 232 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PAAF1Q9BRP4 392 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NAA15Q9BXJ9 866 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KRTAP4-7Q9BYR0 210 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 STK33Q9BYT3 514 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 XPO4Q9C0E2 1151 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GPR88Q9GZN0 384 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ELOVL4Q9GZR5 314 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SDCBP2Q9H190 292 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 VPS16Q9H269 839 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TTYH1Q9H313 450 aaPredicted RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PLEKHA4Q9H4M7 779 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SMYD3Q9H7B4 428 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MMRN2Q9H8L6 949 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CSNK1G1Q9HCP0 422 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SIX2Q9NPC8 291 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MRPL17Q9NRX2 175 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CISHQ9NSE2 258 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MBNL3Q9NUK0 354 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZDHHC7Q9NXF8 308 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 IFNKQ9P0W0 207 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 IMPACTQ9P2X3 320 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 AFF4Q9UHB7 1163 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DPP7Q9UHL4 492 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FBXW11Q9UKB1 542 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KIAA1257Q9ULG3 409 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 BARX2Q9UMQ3 279 aaPredicted RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PLAAQ9Y263 795 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 STXBP5LQ9Y2K9 1186 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TNPO3Q9Y5L0 923 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SNX9Q9Y5X1 595 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CHD9Q3L8U1 2897 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ATP8B3O60423 1300 aa2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TDRD15B5MCY1 1934 aaKnown RBP2.32□□□□□ -2.04
SCARNA16.3-201ENST00000516595 COL4A4P53420 1690 aaPredicted RBP2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TRIOBPQ9H2D6 2365 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KIAA1671Q9BY89 1806 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SCN1AP35498 2009 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FAM92AA1XBS5 289 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZC3H12DA2A288 527 aaKnown RBP2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 WDR27A2RRH5 827 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MTMR11A4FU01 709 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 EPOPA6NHQ4 379 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LRRC53A6NM62 1247 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KIAA1324LA8MWY0 1029 aaPredicted RBP2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 A8MXQ7 604 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NUDT19A8MXV4 375 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GOLGA6L6A8MZA4 724 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NT5C1B-RDH14C9J2C7 533 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 F8W810 466 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ARNTLO00327 626 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 O00370 1275 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KRIT1O00522 736 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PES1O00541 588 aaKnown RBP2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 EPHB6O15197 1021 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GRM6O15303 877 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TEX28O15482 410 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TEX33O43247 280 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 AP5Z1O43299 807 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MED7O43513 233 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MFAP3LO75121 409 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 RFPL3O75679 317 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KRT37O76014 449 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ABLIM3O94929 683 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LSM8O95777 96 aaKnown RBP2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GLUD1P00367 558 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ASLP04424 464 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NTRK1P04629 796 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CAPNS1P04632 268 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MPOP05164 745 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TPM1P09493 284 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CNPP09543 421 aaKnown RBP2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 HNRNPA1P09651 372 aaKnown RBP eCLIP2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SRGAP2BP0DMP2 458 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 HAPLN1P10915 354 aaPredicted RBP2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PYGMP11217 842 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 VDRP11473 427 aa2.31□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CYP11B1P15538 503 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms