RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 LRRC38Q5VT99 294 aa16.03■□□□□ 0.16
POLR2J3-218ENST00000513506 NAIF1Q69YI7 327 aaPredicted RBP16.03■□□□□ 0.16
POLR2J3-218ENST00000513506 TERB1Q8NA31 727 aa16.03■□□□□ 0.16
POLR2J3-218ENST00000513506 ANP32BQ92688 251 aaKnown RBP16.03■□□□□ 0.16
POLR2J3-218ENST00000513506 PBXIP1Q96AQ6 731 aa16.03■□□□□ 0.16
POLR2J3-218ENST00000513506 PEBP4Q96S96 227 aa16.03■□□□□ 0.16
POLR2J3-218ENST00000513506 LACRTQ9GZZ8 138 aa16.03■□□□□ 0.16
POLR2J3-218ENST00000513506 TMPRSS4Q9NRS4 437 aa16.03■□□□□ 0.16
POLR2J3-218ENST00000513506 CLEC4EQ9ULY5 219 aa16.03■□□□□ 0.16
POLR2J3-218ENST00000513506 SIT1Q9Y3P8 196 aa16.03■□□□□ 0.16
POLR2J3-218ENST00000513506 MTF2Q9Y483 593 aaPredicted RBP16.03■□□□□ 0.16
POLR2J3-218ENST00000513506 CXorf51AA0A1B0GTR3 108 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 TYW5A2RUC4 315 aaKnown RBP16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 WASH4PA8MWX3 477 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 CHURC1-FNTBB4DL54 471 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 E9PAM4 449 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 K7EQS6 105 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 TIMM44O43615 452 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 PRPSAP2O60256 369 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 TSPAN3O60637 253 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 TBL1XO60907 577 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 LUC7L3O95232 432 aaKnown RBP16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 CD72P21854 359 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 IL1R2P27930 398 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 SLC1A1P43005 524 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 DGKGP49619 791 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 CDH4P55283 916 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 OXCT1P55809 520 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 LRRC32Q14392 662 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 EIF4HQ15056 248 aaKnown RBP16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 PON2Q15165 354 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 DPYSL2Q16555 572 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 EFHC2Q5JST6 749 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 GRAMD4Q6IC98 578 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 LRRC31Q6UY01 552 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 POLNQ7Z5Q5 900 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 NLRP14Q86W24 1093 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 ACRBPQ8NEB7 543 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 UBE2Q2Q8WVN8 375 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 BTBD6Q96KE9 485 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 PPP1R9BQ96SB3 815 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 FOXQ1Q9C009 403 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 SIK2Q9H0K1 926 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 ARHGEF4Q9NR80 690 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 DNAJC17Q9NVM6 304 aaKnown RBP16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 SALL4Q9UJQ4 1053 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 VANGL2Q9ULK5 521 aa16.02■□□□□ 0.16
POLR2J3-218ENST00000513506 FAM72CH0Y354 149 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 LRIG2O94898 1065 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 HNRNPLP14866 589 aaKnown RBP eCLIP16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 RHOQP17081 205 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 HLA-FP30511 346 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 KIR2DL1P43626 348 aaPredicted RBP16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 VASPP50552 380 aaPredicted RBP16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 ARSEP51690 589 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 DMC1Q14565 340 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 HSF5Q4G112 596 aaPredicted RBP16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 FAM72AQ5TYM5 149 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 FAM72DQ6L9T8 149 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 CXorf57Q6NSI4 855 aaKnown RBP16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 C11orf63Q6NUN7 778 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 SCYL2Q6P3W7 929 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 ZNF783Q6ZMS7 281 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 NUDT18Q6ZVK8 323 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 SETD3Q86TU7 594 aaPredicted RBP16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 FAM72BQ86X60 149 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 VSIG1Q86XK7 387 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 CCAR2Q8N163 923 aaKnown RBP16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 NAT16Q8N8M0 369 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 WFIKKN2Q8TEU8 576 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 ALG14Q96F25 216 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 RPRD1AQ96P16 312 aaPredicted RBP16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 SNRNP25Q9BV90 132 aaKnown RBP16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 CHRDQ9H2X0 955 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 PLK2Q9NYY3 685 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 OR51B4Q9Y5P0 310 aa16.01■□□□□ 0.15
POLR2J3-218ENST00000513506 NPC1O15118 1278 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 PI15O43692 258 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 PAPSS2O95340 614 aaPredicted RBP16■□□□□ 0.15
POLR2J3-218ENST00000513506 EGFP01133 1207 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 APODP05090 189 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 C7P10643 843 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 TCF4P15884 667 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 MRPS21P82921 87 aaKnown RBP16■□□□□ 0.15
POLR2J3-218ENST00000513506 ENPP2Q13822 863 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 E2F5Q15329 346 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 TMEM31Q5JXX7 168 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 ADIPOR2Q86V24 386 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 CFAP52Q8N1V2 620 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 RNF10Q8N5U6 811 aaKnown RBP16■□□□□ 0.15
POLR2J3-218ENST00000513506 KDM1BQ8NB78 822 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 TPCN2Q8NHX9 752 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 WFDC5Q8TCV5 224 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 TSC1Q92574 1164 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 TTC17Q96AE7 1141 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 MAGEB5Q9BZ81 275 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 ZYG11BQ9C0D3 744 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 MFSD1Q9H3U5 465 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 LMAN1LQ9HAT1 526 aa16■□□□□ 0.15
POLR2J3-218ENST00000513506 TMEM248Q9NWD8 314 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms