RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 SMARCAD1Q9H4L7 1026 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 RNF14Q9UBS8 474 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 EMC9Q9Y3B6 208 aa6.16□□□□□ -1.42
SCLT1-207ENST00000506233 LIASO43766 372 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 STRNO43815 780 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 EFCAB14O75071 495 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 IGLV3-25P01717 112 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 ALDH2P05091 517 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 CKMP06732 381 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 DARSP14868 501 aaKnown RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 C5AR1P21730 350 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 CCND3P30281 292 aaPredicted RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 COILP38432 576 aaPredicted RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 HDAC4P56524 1084 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 MGAT5Q09328 741 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 MSLNQ13421 630 aaPredicted RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 MXD4Q14582 209 aaPredicted RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 UBE2R2Q712K3 238 aaPredicted RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 ADAT2Q7Z6V5 191 aaKnown RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 ZNF683Q8IZ20 524 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 ASB12Q8WXK4 309 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 RTP4Q96DX8 246 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 TMEM169Q96HH4 297 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 ERP44Q9BS26 406 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 RNF186Q9NXI6 227 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 ERAP1Q9NZ08 941 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 PDP2Q9P2J9 529 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 TUBD1Q9UJT1 453 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 FBXO10Q9UK96 956 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 SNPHO15079 494 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 PAPSS1O43252 624 aaPredicted RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 GAS2O43903 313 aaKnown RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 TMEM127O75204 238 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 TACC1O75410 805 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 KIF20AO95235 890 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 MCF2P10911 925 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 CKMT1AP12532 417 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 OSMP13725 252 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 HSPA6P17066 643 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 LSSP48449 732 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 GABPB1Q06547 395 aaPredicted RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 TDRD12Q587J7 1177 aaKnown RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 MFSD7Q6UXD7 560 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 USP53Q70EK8 1073 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 MTERF4Q7Z6M4 381 aaKnown RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 MEIOBQ8N635 442 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 NT5C1BQ96P26 610 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 TMEM109Q9BVC6 243 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 CCDC86Q9H6F5 360 aaKnown RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 TMLHEQ9NVH6 421 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 GDAP2Q9NXN4 497 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 NXF1Q9UBU9 619 aaKnown RBP6.15□□□□□ -1.42
SCLT1-207ENST00000506233 CORO2BQ9UQ03 480 aa6.15□□□□□ -1.42
SCLT1-207ENST00000506233 COL4A2P08572 1712 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 SMIM35A0A1B0GVV1 85 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 KLHL33A6NCF5 533 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 LRRIQ4A6NIV6 560 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 PHF2O75151 1096 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 ATP2C2O75185 946 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 KCNH1O95259 989 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 CELF2O95319 508 aaKnown RBP6.15□□□□□ -1.43
SCLT1-207ENST00000506233 BMP1P13497 986 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 TSPAN7P41732 249 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 PTPN5P54829 565 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 MFAP3P55082 362 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 PLAURQ03405 335 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 PTK6Q13882 451 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 SNX17Q15036 470 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 KIZQ2M2Z5 673 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 INTS11Q5TA45 600 aaKnown RBP6.15□□□□□ -1.43
SCLT1-207ENST00000506233 TMEM270Q6UE05 265 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 LCLAT1Q6UWP7 414 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 SPNS2Q8IVW8 549 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 MAML1Q92585 1016 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 NDRG1Q92597 394 aaKnown RBP6.15□□□□□ -1.43
SCLT1-207ENST00000506233 NRSN2Q9GZP1 204 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 UVRAGQ9P2Y5 699 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 ZNF212Q9UDV6 495 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 PCDHGB2Q9Y5G2 931 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 NR2E3Q9Y5X4 410 aa6.15□□□□□ -1.43
SCLT1-207ENST00000506233 KIAA1549LQ6ZVL6 1849 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 PES1O00541 588 aaKnown RBP6.14□□□□□ -1.43
SCLT1-207ENST00000506233 BANF1O75531 89 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 ITGB3P05106 788 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 KRT10P13645 584 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 MECP2P51608 486 aaKnown RBP6.14□□□□□ -1.43
SCLT1-207ENST00000506233 NKG7Q16617 165 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 ANO4Q32M45 955 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 SLC35F1Q5T1Q4 408 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 RNASEH2BQ5TBB1 312 aaKnown RBP6.14□□□□□ -1.43
SCLT1-207ENST00000506233 C9orf57Q5W0N0 161 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 KCNV1Q6PIU1 500 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 NAT8LQ8N9F0 302 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 ANKRD20A12PQ8NF67 263 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 DENND1AQ8TEH3 1009 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 BHMTQ93088 406 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 OLFM3Q96PB7 478 aa6.14□□□□□ -1.43
SCLT1-207ENST00000506233 PGLYRP2Q96PD5 576 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms