RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 SLC20A1Q8WUM9 679 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 UCMAQ8WVF2 138 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 TOE1Q96GM8 510 aaKnown RBP17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 FAM81BQ96LP2 452 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 RAB6CQ9H0N0 254 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 PRSS16Q9NQE7 514 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 EVLQ9UI08 416 aaPredicted RBP17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 SNX10Q9Y5X0 201 aa17.33■□□□□ 0.36
PDLIM7-215ENST00000506161 F8VZ95 297 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 PES1O00541 588 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 SART1O43290 800 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 AP5Z1O43299 807 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 ENGP17813 658 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 CSKP41240 450 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 CENPCQ03188 943 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 NCAPHQ15003 741 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 PSAPL1Q6NUJ1 521 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 SLC23A3Q6PIS1 610 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 APTXQ7Z2E3 356 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 METTL3Q86U44 580 aaKnown RBP17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 CHSY1Q86X52 802 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 IGSF8Q969P0 613 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 SIPA1Q96FS4 1042 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 ZNF419Q96HQ0 510 aaPredicted RBP17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 GPR174Q9BXC1 333 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 CAPN10Q9HC96 672 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 ASNSD1Q9NWL6 643 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 DDIT4Q9NX09 232 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 DACH1Q9UI36 760 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 CACNA1EQ15878 2313 aa17.32■□□□□ 0.36
PDLIM7-215ENST00000506161 ZNF217O75362 1048 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 DAB1O75553 588 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 LUC7L3O95232 432 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 DLDP09622 509 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 CHRNB2P17787 502 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 EEF1GP26641 437 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 CD6P30203 668 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 MAPK8P45983 427 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 SLC6A3Q01959 620 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 BYSLQ13895 437 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 STARD3Q14849 445 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 PITRM1Q5JRX3 1037 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 SPDYCQ5MJ68 293 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 SLC36A4Q6YBV0 504 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 SLC26A9Q7LBE3 791 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 FAM124AQ86V42 546 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 OR2T3Q8NH03 318 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 EPS8L1Q8TE68 723 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 TTC17Q96AE7 1141 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 FAM204AQ9H8W3 233 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 PIGVQ9NUD9 493 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 TMEM63CQ9P1W3 806 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 NOCTQ9UK39 431 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 SIK3Q9Y2K2 1263 aa17.31■□□□□ 0.36
PDLIM7-215ENST00000506161 ASPMQ8IZT6 3477 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 TTC34A8MYJ7 566 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 NPC1O15118 1278 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 TIMM44O43615 452 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 SYNCRIPO60506 623 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 HSF2BPO75031 334 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 IGLV3-19P01714 112 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 APOEP02649 317 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 C7P10643 843 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 MZF1P28698 734 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 ACSL1P33121 698 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 KRT9P35527 623 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 FLT3P36888 993 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 STK19P49842 368 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 JAM2P57087 298 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 RPS14P62263 151 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 NME3Q13232 169 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 CXorf57Q6NSI4 855 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 FBXL22Q6P050 247 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 XYLT1Q86Y38 959 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 ZNF397Q8NF99 534 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 BTN2A3PQ96KV6 586 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 NPY6RQ99463 290 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 NLRC4Q9NPP4 1024 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 TMEM9BQ9NQ34 198 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 SERGEFQ9UGK8 458 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 SLCO3A1Q9UIG8 710 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 HS3ST4Q9Y661 456 aa17.3■□□□□ 0.36
PDLIM7-215ENST00000506161 CHD5Q8TDI0 1954 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 PCNX2A6NKB5 2137 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 TMEM8BA6NDV4 472 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 SIN3BO75182 1162 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 GFPT2O94808 682 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 GJB6O95452 261 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 ADCY5O95622 1261 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 CFIP05156 583 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 GLI1P08151 1106 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 VAV1P15498 845 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 POLR2EP19388 210 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 GABRB2P47870 512 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 COPB1P53618 953 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 RNASE9P60153 205 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 NOMO3P69849 1222 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 CDK17Q00537 523 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 BNC1Q01954 994 aa17.29■□□□□ 0.36
PDLIM7-215ENST00000506161 ARID5AQ03989 594 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms