RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 AMPD1P23109 780 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 HTR7P34969 479 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 IRAK1P51617 712 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 DPYSQ14117 519 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 C5orf22Q49AR2 442 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 OSCP1Q8WVF1 389 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 OTUB2Q96DC9 234 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 PRICKLE1Q96MT3 831 aaPredicted RBP21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 HERPUD2Q9BSE4 406 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 ARHGEF4Q9NR80 690 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 THG1LQ9NWX6 298 aaKnown RBP21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 FAM50BQ9Y247 325 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 ANHXE9PGG2 379 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 ECI2O75521 394 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 HOXC13P31276 330 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 PTPN7P35236 360 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 SGSHP51688 502 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 RPS24P62847 133 aaKnown RBP21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 ADCY2Q08462 1091 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 FCHO2Q0JRZ9 810 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 TPGS1Q6ZTW0 290 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 RFX6Q8HWS3 928 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 TMA16Q96EY4 203 aaKnown RBP21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 ZFYVE19Q96K21 471 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 ZYG11BQ9C0D3 744 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 EFR3BQ9Y2G0 817 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 NUMBLQ9Y6R0 609 aa21.03■□□□□ 0.96
CDC42SE2-206ENST00000503291 CNTN5O94779 1100 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 IL9P15248 144 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 PSMC3P17980 439 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 ERCC2P18074 760 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 HTR4Q13639 388 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 ALFQ53S48 1182 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 RABGAP1LQ5R372 815 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 CREG2Q8IUH2 290 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 PLCD3Q8N3E9 789 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 RASGEF1CQ8N431 466 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 PQLC3Q8N755 202 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 FGGP02679 453 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 GRM2Q14416 872 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 TRIM68Q6AZZ1 485 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 TMEM25Q86YD3 366 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 SLC13A5Q86YT5 568 aaPredicted RBP21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 ASIC4Q96FT7 647 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 CAPZA3Q96KX2 299 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 FAM83CQ9BQN1 747 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 CATSPERBQ9H7T0 1116 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 ETNK2Q9NVF9 386 aa21.02■□□□□ 0.96
CDC42SE2-206ENST00000503291 CST8O60676 142 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 TJP3O95049 919 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 IFNAR2P48551 515 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 DYNLT1P63172 113 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 CIR1Q86X95 450 aaPredicted RBP21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 YAF2Q8IY57 180 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 DDI1Q8WTU0 396 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 DEPDC1BQ8WUY9 529 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 RSAD2Q8WXG1 361 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 IRF7Q92985 503 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 BHMTQ93088 406 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 P2RY11Q96G91 374 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 SPHK2Q9NRA0 654 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 LIMD1Q9UGP4 676 aa21.01■□□□□ 0.95
CDC42SE2-206ENST00000503291 TCRBV7S2A1N4TA0A589 114 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 FGF10O15520 208 aaPredicted RBP21■□□□□ 0.95
CDC42SE2-206ENST00000503291 RHOQP17081 205 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 TFDP2Q14188 446 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 EML3Q32P44 896 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 MPPE1Q53F39 396 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 SLC9A4Q6AI14 798 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 ZDHHC14Q8IZN3 488 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 ACTRT1Q8TDG2 376 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 TTC7AQ9ULT0 858 aaPredicted RBP21■□□□□ 0.95
CDC42SE2-206ENST00000503291 MFHAS1Q9Y4C4 1052 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 DOCK4Q8N1I0 1966 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 DCLK1O15075 740 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 TBL1XO60907 577 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 LONRF2Q1L5Z9 754 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 LY6G5CQ5SRR4 150 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 RHBDF2Q6PJF5 856 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 TFAP2DQ7Z6R9 452 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 ADAT2Q7Z6V5 191 aaKnown RBP21■□□□□ 0.95
CDC42SE2-206ENST00000503291 NLRP14Q86W24 1093 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 HJURPQ8NCD3 748 aaPredicted RBP21■□□□□ 0.95
CDC42SE2-206ENST00000503291 TRMT61BQ9BVS5 477 aaKnown RBP21■□□□□ 0.95
CDC42SE2-206ENST00000503291 EBF3Q9H4W6 596 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 PLK2Q9NYY3 685 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 SMARCAL1Q9NZC9 954 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 CDC23Q9UJX2 597 aa21■□□□□ 0.95
CDC42SE2-206ENST00000503291 TYW5A2RUC4 315 aaKnown RBP20.99■□□□□ 0.95
CDC42SE2-206ENST00000503291 APOL1O14791 398 aa20.99■□□□□ 0.95
CDC42SE2-206ENST00000503291 CYBBP04839 570 aa20.99■□□□□ 0.95
CDC42SE2-206ENST00000503291 KLF1Q13351 362 aaPredicted RBP20.99■□□□□ 0.95
CDC42SE2-206ENST00000503291 PDGFRLQ15198 375 aa20.99■□□□□ 0.95
CDC42SE2-206ENST00000503291 MPP7Q5T2T1 576 aa20.99■□□□□ 0.95
CDC42SE2-206ENST00000503291 TTC39BQ5VTQ0 682 aaPredicted RBP20.99■□□□□ 0.95
CDC42SE2-206ENST00000503291 TMCO3Q6UWJ1 677 aa20.99■□□□□ 0.95
CDC42SE2-206ENST00000503291 BBS12Q6ZW61 710 aa20.99■□□□□ 0.95
CDC42SE2-206ENST00000503291 PLD5Q8N7P1 536 aa20.99■□□□□ 0.95
CDC42SE2-206ENST00000503291 RTL3Q8N8U3 475 aaKnown RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms