RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 CES5AQ6NT32 575 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 DCLRE1AQ6PJP8 1040 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 TEPPQ6URK8 271 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 NFXL1Q6ZNB6 911 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 FAM43BQ6ZT52 329 aaPredicted RBP4.68□□□□□ -1.66
VPS52-222ENST00000495981 Q6ZVL8 140 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 TTC7BQ86TV6 843 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 ECHDC2Q86YB7 292 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 THNSL1Q8IYQ7 743 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 BCL6BQ8N143 479 aaPredicted RBP4.68□□□□□ -1.66
VPS52-222ENST00000495981 LRRC71Q8N4P6 559 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 ZCCHC14Q8WYQ9 949 aaKnown RBP4.68□□□□□ -1.66
VPS52-222ENST00000495981 CCT6BQ92526 530 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 CASP10Q92851 521 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 ARL8AQ96BM9 186 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 SLC35A4Q96G79 324 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 TMEM41AQ96HV5 264 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 MRGPRX1Q96LB2 322 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 ZNF558Q96NG5 402 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 ADI1Q9BV57 179 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 COLEC11Q9BWP8 271 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 ZMYND12Q9H0C1 365 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 TMEM117Q9H0C3 514 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 ZNF302Q9NR11 478 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 RBM12Q9NTZ6 932 aaKnown RBP4.68□□□□□ -1.66
VPS52-222ENST00000495981 RBM28Q9NW13 759 aaKnown RBP4.68□□□□□ -1.66
VPS52-222ENST00000495981 GALNT8Q9NY28 637 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 ARHGAP28Q9P2N2 729 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 PLA2G2DQ9UNK4 145 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 GINS2Q9Y248 185 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 RELNP78509 3460 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 VWA8A3KMH1 1905 aa4.68□□□□□ -1.66
VPS52-222ENST00000495981 TDRD15B5MCY1 1934 aaKnown RBP4.68□□□□□ -1.66
VPS52-222ENST00000495981 TSC2P49815 1807 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 KLF18A0A0U1RQI7 1052 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 A0A1W2PPC4 97 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 A0A1W2PR48 441 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 TMEM150BA6NC51 233 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 PHGDHO43175 533 aaKnown RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 ZBTB43O43298 467 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 LAMTOR5O43504 91 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 TBC1D4O60343 1298 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 MAFO75444 373 aaPredicted RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 MED26O95402 600 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 HPXP02790 462 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 CYBBP04839 570 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 SRGAP2BP0DMP2 458 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 HARSP12081 509 aaKnown RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 TYRP14679 529 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 DARSP14868 501 aaKnown RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 RPL17P18621 184 aaKnown RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 FGFR4P22455 802 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 TRHRP34981 398 aaPredicted RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 GATA4P43694 442 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 CCT5P48643 541 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 PFKPQ01813 784 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 MTAPQ13126 283 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 DAG1Q14118 895 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 FGL2Q14314 439 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 NOMO1Q15155 1222 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 PTPN14Q15678 1187 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 CSRP2Q16527 193 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 MPEG1Q2M385 716 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 PRR16Q569H4 304 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 BMP2KLQ5H9B9 411 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 ZNF484Q5JVG2 852 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 KLHDC7AQ5VTJ3 777 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 JAKMIP3Q5VZ66 844 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 MIS18BP1Q6P0N0 1132 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 ZNF574Q6ZN55 896 aaPredicted RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 GPR149Q86SP6 731 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 PLA2G4DQ86XP0 818 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 DRC7Q8IY82 874 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 RNF168Q8IYW5 571 aaPredicted RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 CACNA2D3Q8IZS8 1091 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 TMTC2Q8N394 836 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 GPR156Q8NFN8 814 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 OR5AN1Q8NGI8 311 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 TBC1D20Q96BZ9 403 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 MISP3Q96FF7 219 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 TSPAN17Q96FV3 270 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 PEX11GQ96HA9 241 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 MPP4Q96JB8 637 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 FAM167AQ96KS9 214 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 EIF2AK1Q9BQI3 630 aaKnown RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 DDX23Q9BUQ8 820 aaKnown RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 SCNM1Q9BWG6 230 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 LSM14BQ9BX40 385 aaKnown RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 AGXT2Q9BYV1 514 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 UNKQ9C0B0 810 aaKnown RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 MYLK2Q9H1R3 596 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 OR10A5Q9H207 317 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 UNC45AQ9H3U1 944 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 KIAA1586Q9HCI6 787 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 PRDM7Q9NQW5 492 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 ENTPD7Q9NQZ7 604 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 PRMT8Q9NR22 394 aaPredicted RBP4.67□□□□□ -1.66
VPS52-222ENST00000495981 C2orf42Q9NWW7 574 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 MARCH5Q9NX47 278 aa4.67□□□□□ -1.66
VPS52-222ENST00000495981 KCMF1Q9P0J7 381 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms