RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ARL13BQ3SXY8 428 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 ACSBG2Q5FVE4 666 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 PPP6R3Q5H9R7 873 aaPredicted RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 FBXO47Q5MNV8 452 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 SH2D4BQ5SQS7 431 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 PPP1R26Q5T8A7 1209 aaPredicted RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 KCNT2Q6UVM3 1135 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 NPNTQ6UXI9 565 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 NECAB2Q7Z6G3 386 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 LINC00523Q86TU6 105 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 PRPF39Q86UA1 669 aaKnown RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 IGDCC3Q8IVU1 814 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 TOP6BLQ8N6T0 577 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 UBA3Q8TBC4 463 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 KCTD13Q8WZ19 329 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 CCDC106Q9BWC9 280 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 SNX25Q9H3E2 840 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 FBXO6Q9NRD1 293 aaPredicted RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 BFARQ9NZS9 450 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 FLRT1Q9NZU1 646 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 NDUFA13Q9P0J0 144 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 NKX1-2Q9UD57 310 aaPredicted RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 TJP2Q9UDY2 1190 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 HMGXB4Q9UGU5 601 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 PRPF19Q9UMS4 504 aaKnown RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 KAT6AQ92794 2004 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 SEPT4O43236 478 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 CCNT2O60583 730 aaKnown RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 PLIN3O60664 434 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 NEBLO76041 1014 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 USP1O94782 785 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 RPLP2P05387 115 aaKnown RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 SRGAP2BP0DMP2 458 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 COL6A2P12110 1019 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 CYBAP13498 195 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 GM2AP17900 193 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 CRABP2P29373 138 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 CYP2C18P33260 490 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 MAGEA12P43365 314 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 HARS2P49590 506 aaKnown RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 TAF6P49848 677 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 COG7P83436 770 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 GAD2Q05329 585 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 SCAPQ12770 1279 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 IFRD2Q12894 506 aaPredicted RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 ZBTB6Q15916 424 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 KHDC1Q4VXA5 237 aaKnown RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 FASTKD1Q53R41 847 aaKnown RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 C1orf146Q5VVC0 180 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 NCBP2-AS2Q69YL0 99 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 TRIM68Q6AZZ1 485 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 PMF1Q6P1K2 205 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 PACS1Q6VY07 963 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 ZNF534Q76KX8 674 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 TTC30AQ86WT1 665 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 MYLK4Q86YV6 388 aaPredicted RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 CCDC117Q8IWD4 279 aaPredicted RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 FBXO16Q8IX29 292 aaPredicted RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 ULK2Q8IYT8 1036 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 APPL2Q8NEU8 664 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 ZFAND2BQ8WV99 257 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 SCG3Q8WXD2 468 aaKnown RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 PPP2R3CQ969Q6 453 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 FAM136AQ96C01 138 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 FGD4Q96M96 766 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 KLF6Q99612 283 aaPredicted RBP11.79□□□□□ -0.52
RFC4-214ENST00000494047 TINF2Q9BSI4 451 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 Q9H521 79 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 MINDY3Q9H8M7 445 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 ZDHHC7Q9NXF8 308 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 DTLQ9NZJ0 730 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 SNX9Q9Y5X1 595 aa11.79□□□□□ -0.52
RFC4-214ENST00000494047 FAM237BA0A1B0GVD1 139 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 H0Y3Z8 333 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 F9P00740 461 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 ENO1P06733 434 aaKnown RBP11.78□□□□□ -0.52
RFC4-214ENST00000494047 ITGA2BP08514 1039 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 CSH1P0DML2 217 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 CSH2P0DML3 217 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 KCNE1P15382 129 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 CCND3P30281 292 aaPredicted RBP11.78□□□□□ -0.52
RFC4-214ENST00000494047 SLC1A6P48664 564 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 NPY2RP49146 381 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 THOC5Q13769 683 aaKnown RBP11.78□□□□□ -0.52
RFC4-214ENST00000494047 PRPSAP1Q14558 356 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 TAF5Q15542 800 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 DGKDQ16760 1214 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 CFAP157Q5JU67 520 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 MBLAC2Q68D91 279 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 LHX8Q68G74 356 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 ANO7Q6IWH7 933 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 ZFP1Q6P2D0 407 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 CASC4Q6P4E1 433 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 MAMDC4Q6UXC1 1216 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 AFAP1L2Q8N4X5 818 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 ARRDC4Q8NCT1 418 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 RBM15BQ8NDT2 890 aaKnown RBP11.78□□□□□ -0.52
RFC4-214ENST00000494047 OR6B3Q8NGW1 331 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 ACTRT2Q8TDY3 377 aa11.78□□□□□ -0.52
RFC4-214ENST00000494047 PTCD2Q8WV60 388 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms