RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 PALM2Q8IXS6 379 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 LRRC34Q8IZ02 419 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 C4orf33Q8N1A6 199 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 NUP93Q8N1F7 819 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 CKAP2Q8WWK9 683 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 TBC1D31Q96DN5 1066 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 MRRFQ96E11 262 aaKnown RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 FCRL2Q96LA5 508 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 SERPINB11Q96P15 392 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 HAPLN3Q96S86 360 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 CYTH2Q99418 400 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 TRIM56Q9BRZ2 755 aaKnown RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 PPP1R12CQ9BZL4 782 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 BRD8Q9H0E9 1235 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 GBA3Q9H227 469 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 CRISPLD1Q9H336 500 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 MLXIPLQ9NP71 852 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 SSU72Q9NP77 194 aaKnown RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 SMYD2Q9NRG4 433 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 IL37Q9NZH6 218 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 SEPT10Q9P0V9 454 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 KLHL8Q9P2G9 620 aaPredicted RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 ZC3H7BQ9UGR2 993 aaKnown RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 SFMBT1Q9UHJ3 866 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 SMG5Q9UPR3 1016 aaKnown RBP10.95□□□□□ -0.66
CLCN6-208ENST00000494028 NUP205Q92621 2012 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 CHD5Q8TDI0 1954 aa10.95□□□□□ -0.66
CLCN6-208ENST00000494028 ANAPC1Q9H1A4 1944 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 FAM159BA6NKW6 160 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 KCNK1O00180 336 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 EBAG9O00559 213 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 NCAM2O15394 837 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 FGF10O15520 208 aaPredicted RBP10.94□□□□□ -0.66
CLCN6-208ENST00000494028 MTSS1O43312 755 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 TYROBPO43914 113 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 SPAG7O75391 227 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 SOAT2O75908 522 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 EFEMP2O95967 443 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 OAS1P00973 400 aaKnown RBP10.94□□□□□ -0.66
CLCN6-208ENST00000494028 APOEP02649 317 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 GALTP07902 379 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 CSH1P0DML2 217 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 CSH2P0DML3 217 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 CPB1P15086 417 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 MX2P20592 715 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 MSH2P43246 934 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 ATN1P54259 1190 aaPredicted RBP10.94□□□□□ -0.66
CLCN6-208ENST00000494028 CCL23P55773 120 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 WDR4P57081 412 aaKnown RBP10.94□□□□□ -0.66
CLCN6-208ENST00000494028 ELAVL2Q12926 359 aaKnown RBP10.94□□□□□ -0.66
CLCN6-208ENST00000494028 PARP6Q2NL67 630 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 CEP57Q86XR8 500 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 KLHDC8BQ8IXV7 354 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 RNF168Q8IYW5 571 aaPredicted RBP10.94□□□□□ -0.66
CLCN6-208ENST00000494028 ARHGAP18Q8N392 663 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 ATAD1Q8NBU5 361 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 CCNYQ8ND76 341 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 GSDMBQ8TAX9 411 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 GDAP1Q8TB36 358 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 SPPL2BQ8TCT7 592 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 RNF34Q969K3 372 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 SLC39A13Q96H72 371 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 SGSM3Q96HU1 749 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 EBNA1BP2Q99848 306 aaKnown RBP10.94□□□□□ -0.66
CLCN6-208ENST00000494028 FERMT1Q9BQL6 677 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 NSRP1Q9H0G5 558 aaKnown RBP10.94□□□□□ -0.66
CLCN6-208ENST00000494028 FBXO44Q9H4M3 255 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 KCNK9Q9NPC2 374 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 NKIRAS1Q9NYS0 192 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 OR12D3Q9UGF7 316 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 NUDT5Q9UKK9 219 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 TBX21Q9UL17 535 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 RRP15Q9Y3B9 282 aaKnown RBP10.94□□□□□ -0.66
CLCN6-208ENST00000494028 PCDHA11Q9Y5I1 949 aa10.94□□□□□ -0.66
CLCN6-208ENST00000494028 A0A1W2PPM1 405 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 CXorf49A8MYA2 514 aaPredicted RBP10.93□□□□□ -0.66
CLCN6-208ENST00000494028 KCNU1A8MYU2 1149 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 SUN1O94901 812 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 ASMTLO95671 621 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 AP2A1O95782 977 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 MOCS2O96007 188 aaPredicted RBP10.93□□□□□ -0.66
CLCN6-208ENST00000494028 HAPLN1P10915 354 aaPredicted RBP10.93□□□□□ -0.66
CLCN6-208ENST00000494028 NFKB1P19838 968 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 MGAT1P26572 445 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 CCR1P32246 355 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 CD68P34810 354 aaPredicted RBP10.93□□□□□ -0.66
CLCN6-208ENST00000494028 CCNFP41002 786 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 SLC18A1P54219 525 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 FAAP100Q0VG06 881 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 PIK3R6Q5UE93 754 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 LRRC8BQ6P9F7 803 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 TRMT10BQ6PF06 316 aaKnown RBP10.93□□□□□ -0.66
CLCN6-208ENST00000494028 SPATS2Q86XZ4 545 aaKnown RBP10.93□□□□□ -0.66
CLCN6-208ENST00000494028 ZNF683Q8IZ20 524 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 PDCD7Q8N8D1 485 aaKnown RBP10.93□□□□□ -0.66
CLCN6-208ENST00000494028 DENND1AQ8TEH3 1009 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 DYDC1Q8WWB3 177 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 FBXO32Q969P5 355 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 VWCEQ96DN2 955 aa10.93□□□□□ -0.66
CLCN6-208ENST00000494028 STAMBPL1Q96FJ0 436 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms