RNA–Protein interactions for RNA: ENST00000489212.2

LIME1-207, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-207ENST00000489212 FNDC3BQ53EP0 1204 aaKnown RBP21.88■■□□□ 1.09
LIME1-207ENST00000489212 FBXL22Q6P050 247 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 TMEFF1Q8IYR6 380 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 ZNF366Q8N895 744 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 ZNF557Q8N988 423 aaPredicted RBP21.88■■□□□ 1.09
LIME1-207ENST00000489212 MSANTD4Q8NCY6 345 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 STAP1Q9ULZ2 295 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 CYP8B1Q9UNU6 501 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 HS3ST4Q9Y661 456 aa21.88■■□□□ 1.09
LIME1-207ENST00000489212 TNRC6BQ9UPQ9 1833 aaKnown RBP21.87■■□□□ 1.09
LIME1-207ENST00000489212 CEP192Q8TEP8 1941 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 PRR5-ARHGAP8B1AHC4 643 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 MAP3K13O43283 966 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 GDF9O60383 454 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 SYNCRIPO60506 623 aaKnown RBP21.87■■□□□ 1.09
LIME1-207ENST00000489212 ADCY5O95622 1261 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 POLR2EP19388 210 aaKnown RBP21.87■■□□□ 1.09
LIME1-207ENST00000489212 CSKP41240 450 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 PTGER3P43115 390 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 DHPSP49366 369 aaPredicted RBP21.87■■□□□ 1.09
LIME1-207ENST00000489212 CXCR3P49682 368 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 IRAK1P51617 712 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 COPAP53621 1224 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 ATXN1P54253 815 aaKnown RBP21.87■■□□□ 1.09
LIME1-207ENST00000489212 ARHGAP8P85298 464 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 AUHQ13825 339 aaKnown RBP21.87■■□□□ 1.09
LIME1-207ENST00000489212 E2F5Q15329 346 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 KIAA1324Q6UXG2 1013 aaKnown RBP21.87■■□□□ 1.09
LIME1-207ENST00000489212 LPCAT2Q7L5N7 544 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 PHLDB2Q86SQ0 1253 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 C14orf80Q86SX3 495 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 IGSF8Q969P0 613 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 TTC17Q96AE7 1141 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 PGAP3Q96FM1 320 aaPredicted RBP21.87■■□□□ 1.09
LIME1-207ENST00000489212 NAP1L5Q96NT1 182 aaPredicted RBP21.87■■□□□ 1.09
LIME1-207ENST00000489212 C11orf70Q9BRQ4 267 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 CBX8Q9HC52 389 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 RXFP3Q9NSD7 469 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 ARHGEF38Q9NXL2 777 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 DLL3Q9NYJ7 618 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 PLA2G4CQ9UP65 541 aa21.87■■□□□ 1.09
LIME1-207ENST00000489212 H0Y626 953 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 ZNF217O75362 1048 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 PAGE1O75459 146 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 ATP5BP06576 529 aaKnown RBP21.86■■□□□ 1.09
LIME1-207ENST00000489212 CENPCQ03188 943 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 PTP4A2Q12974 167 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 SLC25A52Q3SY17 297 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 PITRM1Q5JRX3 1037 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 TCEAL6Q6IPX3 200 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 TRIM72Q6ZMU5 477 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 ARMCX6Q7L4S7 300 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 BNIPLQ7Z465 357 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 TMPRSS6Q8IU80 811 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 BAP1Q92560 729 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 TCEAL3Q969E4 200 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 MYO19Q96H55 970 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 PRDM16Q9HAZ2 1276 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 METTL5Q9NRN9 209 aaKnown RBP21.86■■□□□ 1.09
LIME1-207ENST00000489212 VPS45Q9NRW7 570 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 VANGL2Q9ULK5 521 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 SNX10Q9Y5X0 201 aa21.86■■□□□ 1.09
LIME1-207ENST00000489212 A0A1B0GTH6 734 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 CAVIN2O95810 425 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 CTSOP43234 321 aaPredicted RBP21.85■■□□□ 1.09
LIME1-207ENST00000489212 DEUP1Q05D60 604 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 CAMK2GQ13555 558 aaPredicted RBP21.85■■□□□ 1.09
LIME1-207ENST00000489212 CLEC16AQ2KHT3 1053 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 ARCQ7LC44 396 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 CYP2U1Q7Z449 544 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 CCDC117Q8IWD4 279 aaPredicted RBP21.85■■□□□ 1.09
LIME1-207ENST00000489212 APCDD1Q8J025 514 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 CCAR2Q8N163 923 aaKnown RBP21.85■■□□□ 1.09
LIME1-207ENST00000489212 DEFB119Q8N690 84 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 EMC1Q8N766 993 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 MRGPRX3Q96LB0 322 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 CFAP57Q96MR6 1250 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 TKTL2Q9H0I9 626 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 WDCPQ9H6R7 721 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 TMPRSS4Q9NRS4 437 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 KIAA1522Q9P206 1035 aaPredicted RBP21.85■■□□□ 1.09
LIME1-207ENST00000489212 USP36Q9P275 1121 aaKnown RBP21.85■■□□□ 1.09
LIME1-207ENST00000489212 SPTBN2O15020 2390 aa21.85■■□□□ 1.09
LIME1-207ENST00000489212 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.84■■□□□ 1.09
LIME1-207ENST00000489212 GJB6O95452 261 aa21.84■■□□□ 1.09
LIME1-207ENST00000489212 NUMBP49757 651 aa21.84■■□□□ 1.09
LIME1-207ENST00000489212 RPL6Q02878 288 aaKnown RBP21.84■■□□□ 1.09
LIME1-207ENST00000489212 PLEKHG6Q3KR16 790 aa21.84■■□□□ 1.09
LIME1-207ENST00000489212 RAB6CQ53S08 254 aa21.84■■□□□ 1.09
LIME1-207ENST00000489212 BRMS1LQ5PSV4 323 aa21.84■■□□□ 1.09
LIME1-207ENST00000489212 RABGAP1LQ5R372 815 aa21.84■■□□□ 1.09
LIME1-207ENST00000489212 METTL3Q86U44 580 aaKnown RBP21.84■■□□□ 1.09
LIME1-207ENST00000489212 LUZP1Q86V48 1076 aa21.84■■□□□ 1.09
LIME1-207ENST00000489212 CACUL1Q86Y37 369 aa21.84■■□□□ 1.09
LIME1-207ENST00000489212 JOSD2Q8TAC2 188 aa21.84■■□□□ 1.09
LIME1-207ENST00000489212 SIPA1Q96FS4 1042 aa21.84■■□□□ 1.09
LIME1-207ENST00000489212 RPRD1AQ96P16 312 aaPredicted RBP21.84■■□□□ 1.09
LIME1-207ENST00000489212 AGPAT1Q99943 283 aa21.84■■□□□ 1.09
LIME1-207ENST00000489212 SIK2Q9H0K1 926 aa21.84■■□□□ 1.09
LIME1-207ENST00000489212 RAB6CQ9H0N0 254 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms