RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 GREM1O60565 184 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 NFATC1O95644 943 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 ADH1CP00326 375 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 APOC2P02655 101 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 GOT1P17174 413 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 IL4RP24394 825 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 CXCR5P32302 372 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 IFNAR2P48551 515 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 NR1H3Q13133 447 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 DPYSQ14117 519 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 CCDC85BQ15834 202 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-242ENST00000488013 CA9Q16790 459 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 PREPLQ4J6C6 727 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-242ENST00000488013 RAB6CQ53S08 254 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 FAM133BQ5BKY9 247 aaKnown RBP11.38□□□□□ -0.59
HDLBP-242ENST00000488013 DCAF12L1Q5VU92 463 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 RAP1GAP2Q684P5 730 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 SLC9A4Q6AI14 798 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 SETD3Q86TU7 594 aaPredicted RBP11.38□□□□□ -0.59
HDLBP-242ENST00000488013 CPNE8Q86YQ8 564 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 CREG2Q8IUH2 290 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 MFSD6LQ8IWD5 586 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 LGI2Q8N0V4 545 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 RTL3Q8N8U3 475 aaKnown RBP11.38□□□□□ -0.59
HDLBP-242ENST00000488013 ADAMTS19Q8TE59 1207 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 COG1Q8WTW3 980 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 P3H4Q92791 437 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 ATP2A3Q93084 1043 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 EXOC4Q96A65 974 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 RAB6CQ9H0N0 254 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 L2HGDHQ9H9P8 463 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 ANLNQ9NQW6 1124 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 ARHGEF4Q9NR80 690 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 KLHL11Q9NVR0 708 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 GPATCH2LQ9NWQ4 482 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 DUS2Q9NX74 493 aaKnown RBP11.38□□□□□ -0.59
HDLBP-242ENST00000488013 VANGL2Q9ULK5 521 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 BOLA1Q9Y3E2 137 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 MRFAP1Q9Y605 127 aa11.38□□□□□ -0.59
HDLBP-242ENST00000488013 PRRC2BQ5JSZ5 2229 aaKnown RBP11.37□□□□□ -0.59
HDLBP-242ENST00000488013 PATJQ8NI35 1801 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 TRANK1O15050 2925 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-242ENST00000488013 HEPACAM2A8MVW5 462 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 PI4K2BG5E9Z4 385 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 I6L893 689 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-242ENST00000488013 KRIT1O00522 736 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 CST8O60676 142 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 PRAMEF12O95522 483 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 PSMC3P17980 439 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 ERCC2P18074 760 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 NDST2P52849 883 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 YBEYP58557 167 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-242ENST00000488013 ZXDBP98169 803 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 LMNB2Q03252 620 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 ZNF33AQ06730 810 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 FCHO2Q0JRZ9 810 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 KLF1Q13351 362 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-242ENST00000488013 ZNF177Q13360 481 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-242ENST00000488013 ZNF211Q13398 564 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-242ENST00000488013 XRCC4Q13426 336 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 PAFAH1B3Q15102 231 aaKnown RBP11.37□□□□□ -0.59
HDLBP-242ENST00000488013 PDK1Q15118 436 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 SMAD2Q15796 467 aaKnown RBP11.37□□□□□ -0.59
HDLBP-242ENST00000488013 PARP15Q460N3 678 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 KAZNQ674X7 775 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 NADSYN1Q6IA69 706 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 DRICH1Q6PGQ1 229 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-242ENST00000488013 ZNF572Q7Z3I7 529 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-242ENST00000488013 BBS7Q8IWZ6 715 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 ZNF683Q8IZ20 524 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 ZDHHC14Q8IZN3 488 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 PYROXD2Q8N2H3 581 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 PCDH19Q8TAB3 1148 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 MYADMQ96S97 322 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 SLC2A11Q9BYW1 496 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 HAUS2Q9NVX0 235 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 TMEM248Q9NWD8 314 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 MARK1Q9P0L2 795 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 IGSF9Q9P2J2 1179 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 XPO7Q9UIA9 1087 aaKnown RBP11.37□□□□□ -0.59
HDLBP-242ENST00000488013 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
HDLBP-242ENST00000488013 CXorf51AA0A1B0GTR3 108 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 CTAGE15A4D2H0 777 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 HACD1B0YJ81 288 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 ANHXE9PGG2 379 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 FAM72CH0Y354 149 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 GFRA2O00451 464 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 PPP1R12AO14974 1030 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-242ENST00000488013 MCF2LO15068 1137 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 DCLK1O15075 740 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 FANCGO15287 622 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 CHADO15335 359 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 MTSS1O43312 755 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 CD48P09326 243 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 CTAGE8P0CG41 777 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 GAD2Q05329 585 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 SLC12A1Q13621 1099 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 E2F5Q15329 346 aa11.36□□□□□ -0.59
HDLBP-242ENST00000488013 CCNG2Q16589 344 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms