RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 FNDC3BQ53EP0 1204 aaKnown RBP21.88■■□□□ 1.09
LIME1-204ENST00000476183 FBXL22Q6P050 247 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 TMEFF1Q8IYR6 380 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 ZNF366Q8N895 744 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 ZNF557Q8N988 423 aaPredicted RBP21.88■■□□□ 1.09
LIME1-204ENST00000476183 MSANTD4Q8NCY6 345 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 STAP1Q9ULZ2 295 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 CYP8B1Q9UNU6 501 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 HS3ST4Q9Y661 456 aa21.88■■□□□ 1.09
LIME1-204ENST00000476183 TNRC6BQ9UPQ9 1833 aaKnown RBP21.87■■□□□ 1.09
LIME1-204ENST00000476183 CEP192Q8TEP8 1941 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 PRR5-ARHGAP8B1AHC4 643 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 MAP3K13O43283 966 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 GDF9O60383 454 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 SYNCRIPO60506 623 aaKnown RBP21.87■■□□□ 1.09
LIME1-204ENST00000476183 ADCY5O95622 1261 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 POLR2EP19388 210 aaKnown RBP21.87■■□□□ 1.09
LIME1-204ENST00000476183 CSKP41240 450 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 PTGER3P43115 390 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 DHPSP49366 369 aaPredicted RBP21.87■■□□□ 1.09
LIME1-204ENST00000476183 CXCR3P49682 368 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 IRAK1P51617 712 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 COPAP53621 1224 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 ATXN1P54253 815 aaKnown RBP21.87■■□□□ 1.09
LIME1-204ENST00000476183 ARHGAP8P85298 464 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 AUHQ13825 339 aaKnown RBP21.87■■□□□ 1.09
LIME1-204ENST00000476183 E2F5Q15329 346 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 KIAA1324Q6UXG2 1013 aaKnown RBP21.87■■□□□ 1.09
LIME1-204ENST00000476183 LPCAT2Q7L5N7 544 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 PHLDB2Q86SQ0 1253 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 C14orf80Q86SX3 495 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 IGSF8Q969P0 613 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 TTC17Q96AE7 1141 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 PGAP3Q96FM1 320 aaPredicted RBP21.87■■□□□ 1.09
LIME1-204ENST00000476183 NAP1L5Q96NT1 182 aaPredicted RBP21.87■■□□□ 1.09
LIME1-204ENST00000476183 C11orf70Q9BRQ4 267 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 CBX8Q9HC52 389 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 RXFP3Q9NSD7 469 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 ARHGEF38Q9NXL2 777 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 DLL3Q9NYJ7 618 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 PLA2G4CQ9UP65 541 aa21.87■■□□□ 1.09
LIME1-204ENST00000476183 H0Y626 953 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 ZNF217O75362 1048 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 PAGE1O75459 146 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 ATP5BP06576 529 aaKnown RBP21.86■■□□□ 1.09
LIME1-204ENST00000476183 CENPCQ03188 943 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 PTP4A2Q12974 167 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 SLC25A52Q3SY17 297 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 PITRM1Q5JRX3 1037 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 TCEAL6Q6IPX3 200 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 TRIM72Q6ZMU5 477 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 ARMCX6Q7L4S7 300 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 BNIPLQ7Z465 357 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 TMPRSS6Q8IU80 811 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 BAP1Q92560 729 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 TCEAL3Q969E4 200 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 MYO19Q96H55 970 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 PRDM16Q9HAZ2 1276 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 METTL5Q9NRN9 209 aaKnown RBP21.86■■□□□ 1.09
LIME1-204ENST00000476183 VPS45Q9NRW7 570 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 VANGL2Q9ULK5 521 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 SNX10Q9Y5X0 201 aa21.86■■□□□ 1.09
LIME1-204ENST00000476183 A0A1B0GTH6 734 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 CAVIN2O95810 425 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 CTSOP43234 321 aaPredicted RBP21.85■■□□□ 1.09
LIME1-204ENST00000476183 DEUP1Q05D60 604 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 CAMK2GQ13555 558 aaPredicted RBP21.85■■□□□ 1.09
LIME1-204ENST00000476183 CLEC16AQ2KHT3 1053 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 ARCQ7LC44 396 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 CYP2U1Q7Z449 544 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 CCDC117Q8IWD4 279 aaPredicted RBP21.85■■□□□ 1.09
LIME1-204ENST00000476183 APCDD1Q8J025 514 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 CCAR2Q8N163 923 aaKnown RBP21.85■■□□□ 1.09
LIME1-204ENST00000476183 DEFB119Q8N690 84 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 EMC1Q8N766 993 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 MRGPRX3Q96LB0 322 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 CFAP57Q96MR6 1250 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 TKTL2Q9H0I9 626 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 WDCPQ9H6R7 721 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 TMPRSS4Q9NRS4 437 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 KIAA1522Q9P206 1035 aaPredicted RBP21.85■■□□□ 1.09
LIME1-204ENST00000476183 USP36Q9P275 1121 aaKnown RBP21.85■■□□□ 1.09
LIME1-204ENST00000476183 SPTBN2O15020 2390 aa21.85■■□□□ 1.09
LIME1-204ENST00000476183 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.84■■□□□ 1.09
LIME1-204ENST00000476183 GJB6O95452 261 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 NUMBP49757 651 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 RPL6Q02878 288 aaKnown RBP21.84■■□□□ 1.09
LIME1-204ENST00000476183 PLEKHG6Q3KR16 790 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 RAB6CQ53S08 254 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 BRMS1LQ5PSV4 323 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 RABGAP1LQ5R372 815 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 METTL3Q86U44 580 aaKnown RBP21.84■■□□□ 1.09
LIME1-204ENST00000476183 LUZP1Q86V48 1076 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 CACUL1Q86Y37 369 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 JOSD2Q8TAC2 188 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 SIPA1Q96FS4 1042 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 RPRD1AQ96P16 312 aaPredicted RBP21.84■■□□□ 1.09
LIME1-204ENST00000476183 AGPAT1Q99943 283 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 SIK2Q9H0K1 926 aa21.84■■□□□ 1.09
LIME1-204ENST00000476183 RAB6CQ9H0N0 254 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms