RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 UNC79Q9P2D8 2635 aa5.32□□□□□ -1.56
VPS8-219ENST00000469479 FRMPD2Q68DX3 1309 aaPredicted RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 KANSL1LA0AUZ9 987 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 WDR91A4D1P6 747 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 PJA2O43164 708 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 MYCLP12524 364 aaPredicted RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 RPS9P46781 194 aaKnown RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 CSTF1Q05048 431 aaKnown RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 SERINC3Q13530 473 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 PGM5Q15124 567 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 PTPN14Q15678 1187 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 CDC37Q16543 378 aaPredicted RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 ATXN7L2Q5T6C5 722 aaPredicted RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 ITPRIPQ8IWB1 547 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 MAML2Q8IZL2 1156 aaPredicted RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 DNAJB3Q8WWF6 145 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 CHMP4CQ96CF2 233 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 TMEM47Q9BQJ4 181 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 AIFM2Q9BRQ8 373 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 REXO4Q9GZR2 422 aaKnown RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 CHMP4BQ9H444 224 aaKnown RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 SMARCAD1Q9H4L7 1026 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 CWH43Q9H720 699 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 ECHDC1Q9NTX5 307 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 SNTG2Q9NY99 539 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 COL20A1Q9P218 1284 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 RALYQ9UKM9 306 aaKnown RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 CA14Q9ULX7 337 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 MRPS17Q9Y2R5 130 aaKnown RBP5.31□□□□□ -1.56
VPS8-219ENST00000469479 NUMBLQ9Y6R0 609 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 KIAA1217Q5T5P2 1943 aa5.31□□□□□ -1.56
VPS8-219ENST00000469479 FANCMQ8IYD8 2048 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 SMIM35A0A1B0GVV1 85 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 DHX16O60231 1041 aaKnown RBP5.3□□□□□ -1.56
VPS8-219ENST00000469479 NMT2O60551 498 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 PRAMEF4O60810 478 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 ITGA10O75578 1167 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 RPS6KA5O75582 802 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 CXCL14O95715 111 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 ELANEP08246 267 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 CTSAP10619 480 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 CA8P35219 290 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 SLC26A2P50443 739 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 SP2Q02086 613 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 ZBTB41Q5SVQ8 909 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 LCE1EQ5T753 118 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 TSHZ3Q63HK5 1081 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 B3GNTL1Q67FW5 361 aaPredicted RBP5.3□□□□□ -1.56
VPS8-219ENST00000469479 CDCA2Q69YH5 1023 aaPredicted RBP5.3□□□□□ -1.56
VPS8-219ENST00000469479 DGKHQ86XP1 1220 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 SLC39A11Q8N1S5 342 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 SLC22A17Q8WUG5 538 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 HDAC7Q8WUI4 952 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 SEPT1Q8WYJ6 367 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 UROC1Q96N76 676 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 DDX23Q9BUQ8 820 aaKnown RBP5.3□□□□□ -1.56
VPS8-219ENST00000469479 FAM49AQ9H0Q0 323 aaPredicted RBP5.3□□□□□ -1.56
VPS8-219ENST00000469479 AZI2Q9H6S1 392 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 WDR6Q9NNW5 1121 aaKnown RBP5.3□□□□□ -1.56
VPS8-219ENST00000469479 PRMT8Q9NR22 394 aaPredicted RBP5.3□□□□□ -1.56
VPS8-219ENST00000469479 SSX2IPQ9Y2D8 614 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 IGSF10Q6WRI0 2623 aa5.3□□□□□ -1.56
VPS8-219ENST00000469479 CNOT1A5YKK6 2376 aaKnown RBP5.29□□□□□ -1.56
VPS8-219ENST00000469479 CLUHO75153 1309 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 NAV2Q8IVL1 2488 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 PLXNA4Q9HCM2 1894 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 GCOM1H8Y6P7 765 aaPredicted RBP5.29□□□□□ -1.56
VPS8-219ENST00000469479 DNAJC8O75937 253 aaPredicted RBP5.29□□□□□ -1.56
VPS8-219ENST00000469479 WEE2P0C1S8 567 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 POLR2MP0CAP2 368 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 EPCAMP16422 314 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 ATP2B1P20020 1258 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 TCF7P36402 384 aaPredicted RBP5.29□□□□□ -1.56
VPS8-219ENST00000469479 GATMP50440 423 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 CLRN1P58418 232 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 ZNF460Q14592 562 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 UBXN2BQ14CS0 331 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 ALX1Q15699 326 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 MLF2Q15773 248 aaPredicted RBP5.29□□□□□ -1.56
VPS8-219ENST00000469479 QRICH1Q2TAL8 776 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 C2orf27AQ580R0 203 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 FAM102BQ5T8I3 360 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 UTP14CQ5TAP6 766 aaKnown RBP5.29□□□□□ -1.56
VPS8-219ENST00000469479 N4BP2L1Q5TBK1 243 aaPredicted RBP5.29□□□□□ -1.56
VPS8-219ENST00000469479 MTSS1LQ765P7 747 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 IQCA1Q86XH1 822 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 TICAM2Q86XR7 235 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 ADGRF4Q8IZF3 695 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 VPS52Q8N1B4 723 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 C12orf76Q8N812 135 aaPredicted RBP5.29□□□□□ -1.56
VPS8-219ENST00000469479 MDM1Q8TC05 714 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 SNX33Q8WV41 574 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 TBC1D5Q92609 795 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 PHKBQ93100 1093 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 CLDN23Q96B33 292 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 RNF31Q96EP0 1072 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 CLUHP3Q96NS8 147 aa5.29□□□□□ -1.56
VPS8-219ENST00000469479 ZBP1Q9H171 429 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms