RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 INO80BQ9C086 356 aaPredicted RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 NIF3L1Q9GZT8 377 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 IKZF4Q9H2S9 585 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 SUV39H2Q9H5I1 410 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 SMYD3Q9H7B4 428 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PCDH18Q9HCL0 1135 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 ALG13Q9NP73 1137 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 RBAKQ9NYW8 714 aaPredicted RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 CLIC5Q9NZA1 410 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 SRP68Q9UHB9 627 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 ZNHIT2Q9UHR6 403 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 CCNL1Q9UK58 526 aaPredicted RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PTBP2Q9UKA9 531 aaKnown RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 INPP5FQ9Y2H2 1132 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 ZNF510Q9Y2H8 683 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 CTDP1Q9Y5B0 961 aaPredicted RBP7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 PCDHA10Q9Y5I2 948 aa7.39□□□□□ -1.23
CLSTN1-204ENST00000464286 SSC5DA1L4H1 1573 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 A0A0B4J269 797 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 TCRBV5S1A1TA0A578 114 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 SH3PXD2BA1X283 911 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 BCLAF3A2AJT9 711 aaKnown RBP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 KRBA1A5PL33 1030 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 RGSL1A5PLK6 1076 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 FAM159BA6NKW6 160 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 AP3B1O00203 1094 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 MATN2O00339 956 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 ZBTB39O15060 712 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 RFPL1O75677 317 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 TMEM63AO94886 807 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 GH2P01242 217 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 PROCP04070 461 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 ERBB2P04626 1255 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 MPOP05164 745 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 C8BP07358 591 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 C6orf222P0C671 652 aaPredicted RBP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 MCF2P10911 925 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 COX4I1P13073 169 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 P4HA1P13674 534 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 PSMC3P17980 439 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 PEX2P28328 305 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 POLD1P28340 1107 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 HMOX2P30519 316 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 PPARGP37231 505 aaPredicted RBP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 CD97P48960 835 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 HARS2P49590 506 aaKnown RBP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 ABCE1P61221 599 aaKnown RBP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 SLC25A11Q02978 314 aaKnown RBP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 ADGRE1Q14246 886 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 RFTN1Q14699 578 aaPredicted RBP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 EFTUD2Q15029 972 aaKnown RBP eCLIP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 STRIP1Q5VSL9 837 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 ZPBP2Q6X784 338 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 CHSY3Q70JA7 882 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 TMC7Q7Z402 723 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 PATL1Q86TB9 770 aaKnown RBP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 LDHDQ86WU2 507 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 DEFB107AQ8IZN7 70 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 PACRGLQ8N7B6 248 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 FAM71DQ8N9W8 422 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 DEPTORQ8TB45 409 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 FNDC8Q8TC99 324 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 PYDC1Q8WXC3 89 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 GPRASP2Q96D09 838 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 SGF29Q96ES7 293 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 CNDP1Q96KN2 507 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 CEP170P1Q96L14 293 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 KLF6Q99612 283 aaPredicted RBP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 CCT7Q99832 543 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 EBNA1BP2Q99848 306 aaKnown RBP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 FAM118BQ9BPY3 351 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 APOL6Q9BWW8 343 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 MRPL1Q9BYD6 325 aaKnown RBP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 TRIM15Q9C019 465 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 EFCAB1Q9HAE3 211 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 NEUROD4Q9HD90 331 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 ACP6Q9NPH0 428 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 FAIMQ9NVQ4 179 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 ARHGAP28Q9P2N2 729 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 WRAP73Q9P2S5 460 aaPredicted RBP7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 POLLQ9UGP5 575 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 KIAA1257Q9ULG3 409 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 CCPG1Q9ULG6 757 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 MYRFQ9Y2G1 1151 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 DNAJC16Q9Y2G8 782 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 TTLL3Q9Y4R7 772 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 PCDHA11Q9Y5I1 949 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 SIPA1L1O43166 1804 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 ARID2Q68CP9 1835 aa7.38□□□□□ -1.23
CLSTN1-204ENST00000464286 BTAF1O14981 1849 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 A0A087WXM4 84 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 A0A0J9YVX5 310 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 KLRG2A4D1S0 409 aaPredicted RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 C3orf70A6NLC5 250 aaPredicted RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 HACD1B0YJ81 288 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 TISP43B9A030 160 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 E9PBE3 544 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 F8VP50 259 aa7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 DDX39AO00148 427 aaKnown RBP7.37□□□□□ -1.23
CLSTN1-204ENST00000464286 APOL1O14791 398 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms