RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 MTIF3Q9H2K0 278 aaKnown RBP14.67□□□□□ -0.06
USP39-207ENST00000450066 NINJ2Q9NZG7 142 aa14.67□□□□□ -0.06
USP39-207ENST00000450066 LZTS1Q9Y250 596 aa14.67□□□□□ -0.06
USP39-207ENST00000450066 GOLGA8MH3BSY2 632 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 RNF103O00237 685 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 ALOX15BO15296 676 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 MTSS1O43312 755 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 OPHN1O60890 802 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 CXCL14O95715 111 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 MYZAPP0CAP1 466 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 BMPR1AP36894 532 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 GARSP41250 739 aaKnown RBP14.66□□□□□ -0.06
USP39-207ENST00000450066 ZNF33AQ06730 810 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 MS4A13Q5J8X5 152 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 ANKRD20A2Q5SQ80 823 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 UBAP2Q5T6F2 1119 aaKnown RBP14.66□□□□□ -0.06
USP39-207ENST00000450066 ANKRD20A1Q5TYW2 823 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 ANKRD20A3Q5VUR7 823 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 NUGGCQ68CJ6 796 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 ARHGEF18Q6ZSZ5 1173 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 TMC7Q7Z402 723 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 DNAJB7Q7Z6W7 309 aaPredicted RBP14.66□□□□□ -0.06
USP39-207ENST00000450066 C14orf80Q86SX3 495 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 ZNF683Q8IZ20 524 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 PSMG2Q969U7 264 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 ARL8AQ96BM9 186 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 HTATIP2Q9BUP3 242 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 FRMD8Q9BZ67 464 aaPredicted RBP14.66□□□□□ -0.06
USP39-207ENST00000450066 ETNK1Q9HBU6 452 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 SAYSD1Q9NPB0 183 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 PPARGC1AQ9UBK2 798 aaKnown RBP14.66□□□□□ -0.06
USP39-207ENST00000450066 UXTQ9UBK9 157 aaPredicted RBP14.66□□□□□ -0.06
USP39-207ENST00000450066 IRAK3Q9Y616 596 aa14.66□□□□□ -0.06
USP39-207ENST00000450066 LCHNA4D1U4 455 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 WASH4PA8MWX3 477 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 POLR3GO15318 223 aaPredicted RBP14.65□□□□□ -0.06
USP39-207ENST00000450066 EIF3HO15372 352 aaKnown RBP eCLIP14.65□□□□□ -0.06
USP39-207ENST00000450066 TGM5O43548 720 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 METTL18O95568 372 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 ACSL3O95573 720 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 SHBGP04278 402 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 GAD2Q05329 585 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 WASHC5Q12768 1159 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 CBLBQ13191 982 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 PLD1Q13393 1074 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 AUHQ13825 339 aaKnown RBP14.65□□□□□ -0.06
USP39-207ENST00000450066 TTMPQ5BVD1 217 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 LRRC31Q6UY01 552 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 PPP1R21Q6ZMI0 780 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 PDIK1LQ8N165 341 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 TTC25Q96NG3 672 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 TMEM109Q9BVC6 243 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 NACA2Q9H009 215 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 TMBIM4Q9HC24 238 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 VPS18Q9P253 973 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 IGLV3-10A0A075B6K4 115 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.65□□□□□ -0.06
USP39-207ENST00000450066 E7ESA3 106 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 ADH1AP07327 375 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 HMBSP08397 361 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 CA8P35219 290 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 CTNNB1P35222 781 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 COG7P83436 770 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 CROCCP2Q86T23 111 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 ITIH5Q86UX2 942 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 RTL3Q8N8U3 475 aaKnown RBP14.65□□□□□ -0.06
USP39-207ENST00000450066 EXOC4Q96A65 974 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 C9orf72Q96LT7 481 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 LBHD1Q9BQE6 289 aaPredicted RBP14.65□□□□□ -0.06
USP39-207ENST00000450066 DONSONQ9NYP3 566 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 RWDD3Q9Y3V2 267 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 NR2E3Q9Y5X4 410 aa14.65□□□□□ -0.06
USP39-207ENST00000450066 COCHO43405 550 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 APRTP07741 180 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 FDFT1P37268 417 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 PDIA2Q13087 525 aaKnown RBP14.64□□□□□ -0.07
USP39-207ENST00000450066 SEMA5AQ13591 1074 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 KRT71Q3SY84 523 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 FNBP1LQ5T0N5 605 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 FAM182AQ5T1J6 154 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 LILRA6Q6PI73 481 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 ZBED8Q8IZ13 594 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 CELF6Q96J87 481 aaKnown RBP14.64□□□□□ -0.07
USP39-207ENST00000450066 PRMT1Q99873 361 aaKnown RBP14.64□□□□□ -0.07
USP39-207ENST00000450066 ZYG11BQ9C0D3 744 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 SEPT10Q9P0V9 454 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 VANGL2Q9ULK5 521 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 ZMYND8Q9ULU4 1186 aaPredicted RBP14.64□□□□□ -0.07
USP39-207ENST00000450066 ASB3Q9Y575 518 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 GOLGA6CA6NDK9 693 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 ABHD2P08910 425 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 SPATA31D3P0C874 917 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 GOLGA6DP0CG33 693 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 RHOQP17081 205 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 TPSB2P20231 275 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 TPSAB1Q15661 275 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 FAXCQ5TGI0 409 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 AFMIDQ63HM1 303 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 SPATA31D4Q6ZUB0 917 aa14.64□□□□□ -0.07
USP39-207ENST00000450066 NLRP14Q86W24 1093 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms