RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 CCDC110Q8TBZ0 833 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 MICAL1Q8TDZ2 1067 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 CPT1BQ92523 772 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 PRCCQ92733 491 aaPredicted RBP10.88□□□□□ -0.67
NEFM-202ENST00000433454 PLD4Q96BZ4 506 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 KLC2Q9H0B6 622 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 PABPC3Q9H361 631 aaKnown RBP10.88□□□□□ -0.67
NEFM-202ENST00000433454 OGFRQ9NZT2 677 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 VANGL2Q9ULK5 521 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 NR2E3Q9Y5X4 410 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 RANBP2P49792 3224 aaKnown RBP10.88□□□□□ -0.67
NEFM-202ENST00000433454 ANAPC1Q9H1A4 1944 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 CA3P07451 260 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 HARS2P49590 506 aaKnown RBP10.88□□□□□ -0.67
NEFM-202ENST00000433454 AUHQ13825 339 aaKnown RBP10.88□□□□□ -0.67
NEFM-202ENST00000433454 ARHGEF18Q6ZSZ5 1173 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 SPRED2Q7Z698 418 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 C14orf80Q86SX3 495 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 IQCKQ8N0W5 287 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 TAB3Q8N5C8 712 aaPredicted RBP10.88□□□□□ -0.67
NEFM-202ENST00000433454 RTL3Q8N8U3 475 aaKnown RBP10.88□□□□□ -0.67
NEFM-202ENST00000433454 HDAC11Q96DB2 347 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 P2RY11Q96G91 374 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 SAMD11Q96NU1 681 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 ZNF334Q9HCZ1 680 aaPredicted RBP10.88□□□□□ -0.67
NEFM-202ENST00000433454 RAB6BQ9NRW1 208 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 DONSONQ9NYP3 566 aa10.88□□□□□ -0.67
NEFM-202ENST00000433454 PPARGC1AQ9UBK2 798 aaKnown RBP10.88□□□□□ -0.67
NEFM-202ENST00000433454 CHD7Q9P2D1 2997 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 GBF1Q92538 1859 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 A0A0A0MRY4 1105 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 GRXCR1A8MXD5 290 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 RNF103O00237 685 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 MTSS1O43312 755 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 ARHGEF15O94989 841 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 GARSP41250 739 aaKnown RBP10.87□□□□□ -0.67
NEFM-202ENST00000433454 KCNQ1P51787 676 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 PPIDQ08752 370 aaKnown RBP10.87□□□□□ -0.67
NEFM-202ENST00000433454 DENND2CQ68D51 928 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 FAM109BQ6ICB4 259 aaPredicted RBP10.87□□□□□ -0.67
NEFM-202ENST00000433454 TRMT10CQ7L0Y3 403 aaKnown RBP10.87□□□□□ -0.67
NEFM-202ENST00000433454 TMEM150AQ86TG1 271 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 CHSY1Q86X52 802 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 TP53INP2Q8IXH6 220 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 ZNF683Q8IZ20 524 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 NAT8LQ8N9F0 302 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 CELF6Q96J87 481 aaKnown RBP10.87□□□□□ -0.67
NEFM-202ENST00000433454 SPATA13Q96N96 652 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 ZIM3Q96PE6 472 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 RBM15Q96T37 977 aaKnown RBP eCLIP10.87□□□□□ -0.67
NEFM-202ENST00000433454 ZYG11BQ9C0D3 744 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 MED4Q9NPJ6 270 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 PLAAQ9Y263 795 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 OBSL1O75147 1896 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 DOCK4Q8N1I0 1966 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 NUP205Q92621 2012 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 IGLV3-10A0A075B6K4 115 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 C2orf78A6NCI8 922 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 GRM6O15303 877 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 CHADO15335 359 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 OPHN1O60890 802 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 F11P03951 625 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 SLC11A2P49281 568 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 CLCN4P51793 760 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 SHHQ15465 462 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 ARTNQ5T4W7 220 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 ANKRD22Q5VYY1 191 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 RAP1GAP2Q684P5 730 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 ATPAF2Q8N5M1 289 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 GOLGA6L1Q8N7Z2 621 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 ABHD8Q96I13 439 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 TGS1Q96RS0 853 aaKnown RBP10.87□□□□□ -0.67
NEFM-202ENST00000433454 SEMA4AQ9H3S1 761 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 IL21Q9HBE4 155 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 TRPC7Q9HCX4 862 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 DNAJC17Q9NVM6 304 aaKnown RBP10.87□□□□□ -0.67
NEFM-202ENST00000433454 MPP6Q9NZW5 540 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 SEPT10Q9P0V9 454 aa10.87□□□□□ -0.67
NEFM-202ENST00000433454 CHD9Q3L8U1 2897 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 WASH4PA8MWX3 477 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 AGPSO00116 658 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 RHOQP17081 205 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 ZNF33AQ06730 810 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 KCNJ11Q14654 390 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 HIF1AQ16665 826 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 ANKRD20A2Q5SQ80 823 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 ANKRD20A1Q5TYW2 823 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 ANKRD20A3Q5VUR7 823 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 FBXL22Q6P050 247 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 LRIG3Q6UXM1 1119 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 CENPUQ71F23 418 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 RTL10Q7L3V2 364 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 RELL1Q8IUW5 271 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 MRPS31Q92665 395 aaKnown RBP10.86□□□□□ -0.67
NEFM-202ENST00000433454 ZBTB9Q96C00 473 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 PWWP2AQ96N64 755 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 RPRD1AQ96P16 312 aaPredicted RBP10.86□□□□□ -0.67
NEFM-202ENST00000433454 GCNAQ96QF7 691 aa10.86□□□□□ -0.67
NEFM-202ENST00000433454 PRMT1Q99873 361 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms