RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 CHSY1Q86X52 802 aa15.75■□□□□ 0.11
PTCD1-204ENST00000430982 NUCKS1Q9H1E3 243 aaKnown RBP15.75■□□□□ 0.11
PTCD1-204ENST00000430982 HAUS4Q9H6D7 363 aa15.75■□□□□ 0.11
PTCD1-204ENST00000430982 ZDHHC4Q9NPG8 344 aa15.75■□□□□ 0.11
PTCD1-204ENST00000430982 TMEM9BQ9NQ34 198 aa15.75■□□□□ 0.11
PTCD1-204ENST00000430982 RRN3Q9NYV6 651 aa15.75■□□□□ 0.11
PTCD1-204ENST00000430982 AIPL1Q9NZN9 384 aa15.75■□□□□ 0.11
PTCD1-204ENST00000430982 STIM2Q9P246 746 aa15.75■□□□□ 0.11
PTCD1-204ENST00000430982 CLEC4EQ9ULY5 219 aa15.75■□□□□ 0.11
PTCD1-204ENST00000430982 IGSF10Q6WRI0 2623 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 ASCC3Q8N3C0 2202 aaKnown RBP15.74■□□□□ 0.11
PTCD1-204ENST00000430982 A0A1W2PQJ5 194 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 TYW5A2RUC4 315 aaKnown RBP15.74■□□□□ 0.11
PTCD1-204ENST00000430982 TMCO5BA8MYB1 307 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 GFRA2O00451 464 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 GJB6O95452 261 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 KLF8O95600 359 aaPredicted RBP15.74■□□□□ 0.11
PTCD1-204ENST00000430982 APBB3O95704 486 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 CALB1P05937 261 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 SKILP12757 684 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 TFE3P19532 575 aaPredicted RBP15.74■□□□□ 0.11
PTCD1-204ENST00000430982 ABCB4P21439 1286 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 HOXD9P28356 352 aaPredicted RBP15.74■□□□□ 0.11
PTCD1-204ENST00000430982 FLT3P36888 993 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 DEUP1Q05D60 604 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 PTP4A2Q12974 167 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 EIF4EBP2Q13542 120 aaPredicted RBP15.74■□□□□ 0.11
PTCD1-204ENST00000430982 DMC1Q14565 340 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 PIK3R6Q5UE93 754 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 OTUD1Q5VV17 481 aaPredicted RBP15.74■□□□□ 0.11
PTCD1-204ENST00000430982 RAP1GAP2Q684P5 730 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 SND1Q7KZF4 910 aaKnown RBP eCLIP15.74■□□□□ 0.111e-25■□□□□ 8.6
PTCD1-204ENST00000430982 PHF13Q86YI8 300 aaPredicted RBP15.74■□□□□ 0.11
PTCD1-204ENST00000430982 LGI2Q8N0V4 545 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 ALLCQ8N6M5 410 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 EMC1Q8N766 993 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 ZNF513Q8N8E2 541 aaPredicted RBP15.74■□□□□ 0.11
PTCD1-204ENST00000430982 TXNDC5Q8NBS9 432 aaKnown RBP15.74■□□□□ 0.11
PTCD1-204ENST00000430982 HJURPQ8NCD3 748 aaPredicted RBP15.74■□□□□ 0.11
PTCD1-204ENST00000430982 BTN2A3PQ96KV6 586 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 TBCBQ99426 244 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 NPY6RQ99463 290 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 TMEM59LQ9UK28 342 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 FBXO10Q9UK96 956 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 MSRB2Q9Y3D2 182 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 MYOFQ9NZM1 2061 aa15.74■□□□□ 0.11
PTCD1-204ENST00000430982 ABCA7Q8IZY2 2146 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 KCNU1A8MYU2 1149 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 PRRT4C9JH25 899 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 TACR2P21452 398 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 PRKCIP41743 596 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 KIR2DL1P43626 348 aaPredicted RBP15.73■□□□□ 0.11
PTCD1-204ENST00000430982 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
PTCD1-204ENST00000430982 SLC25A52Q3SY17 297 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 MS4A13Q5J8X5 152 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 EGFLAMQ63HQ2 1017 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 ACAD10Q6JQN1 1059 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 TRNP1Q6NT89 227 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 ZNF571Q7Z3V5 609 aaPredicted RBP15.73■□□□□ 0.11
PTCD1-204ENST00000430982 ANKS1BQ7Z6G8 1248 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 IL17RCQ8NAC3 791 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 IQCDQ96DY2 449 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 MYEOVQ96EZ4 313 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 PRICKLE1Q96MT3 831 aaPredicted RBP15.73■□□□□ 0.11
PTCD1-204ENST00000430982 SYT11Q9BT88 431 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 SELENOOQ9BVL4 669 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 SLC2A11Q9BYW1 496 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 PIGVQ9NUD9 493 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 TAS2R14Q9NYV8 317 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 CALCOCO1Q9P1Z2 691 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 EVLQ9UI08 416 aaPredicted RBP15.73■□□□□ 0.11
PTCD1-204ENST00000430982 MMP17Q9ULZ9 603 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 SLC27A6Q9Y2P4 619 aa15.73■□□□□ 0.11
PTCD1-204ENST00000430982 TNRC6BQ9UPQ9 1833 aaKnown RBP15.73■□□□□ 0.11
PTCD1-204ENST00000430982 FAM221BA6H8Z2 402 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 F5H5T6 163 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 KHNYNO15037 678 aaKnown RBP15.72■□□□□ 0.11
PTCD1-204ENST00000430982 F9P00740 461 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 KRT3P12035 628 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 WASP42768 502 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 RPS24P62847 133 aaKnown RBP15.72■□□□□ 0.11
PTCD1-204ENST00000430982 ZBED6P86452 979 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 ATP11AP98196 1134 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 GEN1Q17RS7 908 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 HSF5Q4G112 596 aaPredicted RBP15.72■□□□□ 0.11
PTCD1-204ENST00000430982 TDRD12Q587J7 1177 aaKnown RBP15.72■□□□□ 0.11
PTCD1-204ENST00000430982 EOGTQ5NDL2 527 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 DNAJC24Q6P3W2 148 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 MON1BQ7L1V2 547 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 TRMT11Q7Z4G4 463 aaKnown RBP15.72■□□□□ 0.11
PTCD1-204ENST00000430982 C11orf74Q86VG3 221 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 RASSF3Q86WH2 238 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 CCDC117Q8IWD4 279 aaPredicted RBP15.72■□□□□ 0.11
PTCD1-204ENST00000430982 CFAP52Q8N1V2 620 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 TSTD1Q8NFU3 115 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 JOSD2Q8TAC2 188 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 OLIG1Q8TAK6 271 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 RXFP2Q8WXD0 754 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 CFAP57Q96MR6 1250 aa15.72■□□□□ 0.11
PTCD1-204ENST00000430982 IRX2Q9BZI1 471 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms