RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 PPIDQ08752 370 aaKnown RBP13.02□□□□□ -0.33
CTCFL-204ENST00000422869 CCDC14Q49A88 953 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 PPP6R3Q5H9R7 873 aaPredicted RBP13.02□□□□□ -0.33
CTCFL-204ENST00000422869 C16orf89Q6UX73 402 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 BNC2Q6ZN30 1099 aaPredicted RBP13.02□□□□□ -0.33
CTCFL-204ENST00000422869 RIN3Q8TB24 985 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 PRPF31Q8WWY3 499 aaKnown RBP13.02□□□□□ -0.33
CTCFL-204ENST00000422869 LPAR1Q92633 364 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 HSPBAP1Q96EW2 488 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 GCOM2Q9BZD3 368 aaPredicted RBP13.02□□□□□ -0.33
CTCFL-204ENST00000422869 INO80BQ9C086 356 aaPredicted RBP13.02□□□□□ -0.33
CTCFL-204ENST00000422869 PIH1D1Q9NWS0 290 aaKnown RBP13.02□□□□□ -0.33
CTCFL-204ENST00000422869 VPS28Q9UK41 221 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 PSME4Q14997 1843 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 OGTO15294 1046 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 TRPA1O75762 1119 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 THRAP10827 490 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 PKNOX1P55347 436 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 LPIN1Q14693 890 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 SCYL2Q6P3W7 929 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 CASC4Q6P4E1 433 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 C4orf22Q6V702 233 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 FAM183BPQ6ZVS7 135 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 CDKL3Q8IVW4 592 aaPredicted RBP13.02□□□□□ -0.33
CTCFL-204ENST00000422869 TMEM102Q8N9M5 508 aaPredicted RBP13.02□□□□□ -0.33
CTCFL-204ENST00000422869 UBA3Q8TBC4 463 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 AGR3Q8TD06 166 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 CNDP1Q96KN2 507 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 TCF7L2Q9NQB0 619 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 RNF146Q9NTX7 359 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 NR2E3Q9Y5X4 410 aa13.02□□□□□ -0.33
CTCFL-204ENST00000422869 F5H423 210 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 MX2P20592 715 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 HSPA13P48723 471 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 CMC1Q7Z7K0 106 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 CHERPQ8IWX8 916 aaKnown RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 PLD6Q8N2A8 252 aaKnown RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 RNF148Q8N7C7 305 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 ARNTL2Q8WYA1 636 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 TMIGD2Q96BF3 282 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 PPP1R14BQ96C90 147 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 ACO2Q99798 780 aaKnown RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 FERMT1Q9BQL6 677 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 SNRNP25Q9BV90 132 aaKnown RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 TMEM165Q9HC07 324 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 ZNF302Q9NR11 478 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 RSL24D1Q9UHA3 163 aaKnown RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 RNF11Q9Y3C5 154 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 GOLGA8QA0A0J9YX86 632 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 RGSL1A5PLK6 1076 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 GOLGA8OA6NCC3 632 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 GOLGA8NF8WBI6 632 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 HSPA4LO95757 839 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 HNRNPCP07910 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 ZNF26P17031 533 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 TYK2P29597 1187 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 ATXN3P54252 364 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 COG7P83436 770 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 PPP2R5DQ14738 602 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 TRIM67Q6ZTA4 783 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 ZNF554Q86TJ5 538 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 ERI1Q8IV48 349 aaKnown RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 LRRC43Q8N309 656 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 FNDC8Q8TC99 324 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 CDKL2Q92772 493 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 USP13Q92995 863 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 ZNF512Q96ME7 567 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 WDR55Q9H6Y2 383 aaPredicted RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 LIN28AQ9H9Z2 209 aaKnown RBP13.01□□□□□ -0.33
CTCFL-204ENST00000422869 THEGQ9P2T0 379 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 SIX4Q9UIU6 781 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 PCDHGA4Q9Y5G9 962 aa13.01□□□□□ -0.33
CTCFL-204ENST00000422869 G3V2L1 256 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 AMHP03971 560 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 KRT19P08727 400 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 ZNF23P17027 643 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 PTPN1P18031 435 aaKnown RBP13□□□□□ -0.33
CTCFL-204ENST00000422869 EPHA3P29320 983 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 ADRM1Q16186 407 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 BOLA3Q53S33 107 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 TDRD5Q8NAT2 981 aaKnown RBP13□□□□□ -0.33
CTCFL-204ENST00000422869 SNRNP27Q8WVK2 155 aaKnown RBP13□□□□□ -0.33
CTCFL-204ENST00000422869 RCN3Q96D15 328 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 ZNF670Q9BS34 389 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 MRPL4Q9BYD3 311 aaKnown RBP13□□□□□ -0.33
CTCFL-204ENST00000422869 NGRNQ9NPE2 291 aaKnown RBP13□□□□□ -0.33
CTCFL-204ENST00000422869 SNX15Q9NRS6 342 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 PGAP2Q9UHJ9 254 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 BLOC1S6Q9UL45 172 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 C7orf72A4D263 438 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 SPATA31C2B4DYI2 1134 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 STX16-NPEPL1H3BU86 382 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 ACOT8O14734 319 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 CILPO75339 1184 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 RNASEH2AO75792 299 aaKnown RBP13□□□□□ -0.33
CTCFL-204ENST00000422869 SETSIPP0DME0 302 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 CYP3A5P20815 502 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 PAX3P23760 479 aa13□□□□□ -0.33
CTCFL-204ENST00000422869 PLOD1Q02809 727 aaPredicted RBP13□□□□□ -0.33
CTCFL-204ENST00000422869 SFSWAPQ12872 951 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms