RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 CDH7Q9ULB5 785 aa12.98□□□□□ -0.33
PMS1-204ENST00000409823 GRXCR2A6NFK2 248 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 CES2O00748 559 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 APOL1O14791 398 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 KCNJ1P48048 391 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 TFF2Q03403 129 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 SLC10A2Q12908 348 aaPredicted RBP12.97□□□□□ -0.33
PMS1-204ENST00000409823 SIX1Q15475 284 aaPredicted RBP12.97□□□□□ -0.33
PMS1-204ENST00000409823 PPP2R5EQ16537 467 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 NCBP2-AS2Q69YL0 99 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 Q6ZNB5 142 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 ZNF683Q8IZ20 524 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 TBC1D31Q96DN5 1066 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 KXD1Q9BQD3 176 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 RPP25Q9BUL9 199 aaKnown RBP12.97□□□□□ -0.33
PMS1-204ENST00000409823 DDX47Q9H0S4 455 aaKnown RBP12.97□□□□□ -0.33
PMS1-204ENST00000409823 ZNF77Q15935 545 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 MANEALQ5VSG8 457 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 PARM1Q6UWI2 310 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 HTR3DQ70Z44 454 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 PRELID2Q8N945 189 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 ACTL9Q8TC94 416 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 FGF14Q92915 247 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 FAF2Q96CS3 445 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 PRDM6Q9NQX0 595 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 GDE1Q9NZC3 331 aa12.97□□□□□ -0.33
PMS1-204ENST00000409823 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.97□□□□□ -0.33
PMS1-204ENST00000409823 V9GYY5 206 aaPredicted RBP12.97□□□□□ -0.33
PMS1-204ENST00000409823 MFSD11O43934 449 aa12.96□□□□□ -0.33
PMS1-204ENST00000409823 OTUD4Q01804 1114 aaKnown RBP12.96□□□□□ -0.33
PMS1-204ENST00000409823 GRM2Q14416 872 aa12.96□□□□□ -0.33
PMS1-204ENST00000409823 TMCO3Q6UWJ1 677 aa12.96□□□□□ -0.33
PMS1-204ENST00000409823 CELF5Q8N6W0 485 aaKnown RBP12.96□□□□□ -0.33
PMS1-204ENST00000409823 NOA1Q8NC60 698 aaKnown RBP12.96□□□□□ -0.33
PMS1-204ENST00000409823 P3H4Q92791 437 aa12.96□□□□□ -0.33
PMS1-204ENST00000409823 ZYG11BQ9C0D3 744 aa12.96□□□□□ -0.33
PMS1-204ENST00000409823 TTC7AQ9ULT0 858 aaPredicted RBP12.96□□□□□ -0.33
PMS1-204ENST00000409823 HEPACAM2A8MVW5 462 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 DCLK1O15075 740 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 LAMP2P13473 410 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 SLC9A4Q6AI14 798 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 BBS12Q6ZW61 710 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 TMEM25Q86YD3 366 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 TDRD5Q8NAT2 981 aaKnown RBP12.96□□□□□ -0.34
PMS1-204ENST00000409823 TTC8Q8TAM2 541 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 DDI1Q8WTU0 396 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 UBE2Q2Q8WVN8 375 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 HLA-CQ95604 372 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 ASIC4Q96FT7 647 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 KRT12Q99456 494 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 DCLK3Q9C098 648 aa12.96□□□□□ -0.34
PMS1-204ENST00000409823 CTAGE15A4D2H0 777 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 TBL1XO60907 577 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 CTAGE8P0CG41 777 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 PFKLP17858 780 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 FCARP24071 287 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 MTHFRP42898 656 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 NRLP54845 237 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 TNK2Q07912 1038 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 TFDP2Q14188 446 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 CTAGE6Q86UF2 777 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 CTAGE4Q8IX94 777 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 MNS1Q8NEH6 495 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 RSAD2Q8WXG1 361 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 MAGOHBQ96A72 148 aaKnown RBP12.95□□□□□ -0.34
PMS1-204ENST00000409823 TMA16Q96EY4 203 aaKnown RBP12.95□□□□□ -0.34
PMS1-204ENST00000409823 NAP1L3Q99457 506 aaPredicted RBP12.95□□□□□ -0.34
PMS1-204ENST00000409823 PLA2G2FQ9BZM2 168 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 DTLQ9NZJ0 730 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 DNPEPQ9ULA0 475 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 DOCK8Q8NF50 2099 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 E2F8A0AVK6 867 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 OR1E1P30953 314 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 PTPN7P35236 360 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 CKAP4Q07065 602 aaKnown RBP12.95□□□□□ -0.34
PMS1-204ENST00000409823 ANO4Q32M45 955 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 GPR153Q6NV75 609 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 TTC27Q6P3X3 843 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 PRUNE1Q86TP1 453 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 OR52K2Q8NGK3 314 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 DEPDC1BQ8WUY9 529 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 SUSD6Q92537 303 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 RPGRIP1Q96KN7 1286 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 EBF3Q9H4W6 596 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 ZFP14Q9HCL3 533 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 RCOR3Q9P2K3 495 aaPredicted RBP12.95□□□□□ -0.34
PMS1-204ENST00000409823 RNF14Q9UBS8 474 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 CLEC4EQ9ULY5 219 aa12.95□□□□□ -0.34
PMS1-204ENST00000409823 APOC4-APOC2K7ER74 178 aa12.94□□□□□ -0.34
PMS1-204ENST00000409823 DFFAO00273 331 aa12.94□□□□□ -0.34
PMS1-204ENST00000409823 APOC2P02655 101 aa12.94□□□□□ -0.34
PMS1-204ENST00000409823 CARNMT1Q8N4J0 409 aa12.94□□□□□ -0.34
PMS1-204ENST00000409823 LGMNQ99538 433 aa12.94□□□□□ -0.34
PMS1-204ENST00000409823 CATSPERBQ9H7T0 1116 aa12.94□□□□□ -0.34
PMS1-204ENST00000409823 AMACRQ9UHK6 382 aa12.94□□□□□ -0.34
PMS1-204ENST00000409823 IGLV3-10A0A075B6K4 115 aa12.94□□□□□ -0.34
PMS1-204ENST00000409823 GOLGA6L10A0A0M3HER8 536 aa12.94□□□□□ -0.34
PMS1-204ENST00000409823 NEDD8-MDP1E9PL57 170 aa12.94□□□□□ -0.34
PMS1-204ENST00000409823 WEE1P30291 646 aa12.94□□□□□ -0.34
PMS1-204ENST00000409823 HCAR3P49019 387 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms