RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 CBFA2T3O75081 653 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 LCP1P13796 627 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 LHX1P48742 406 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 BCAR1P56945 870 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 MSLNQ13421 630 aaPredicted RBP19.52■□□□□ 0.72
CCDC50-202ENST00000392456 LRRTM3Q86VH5 581 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 LRRC49Q8IUZ0 686 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 OR10T2Q8NGX3 314 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 SLC7A5P2Q9GIP4 190 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 TMLHEQ9NVH6 421 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 TTC7AQ9ULT0 858 aaPredicted RBP19.52■□□□□ 0.72
CCDC50-202ENST00000392456 PSMA2P25787 234 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 BCAT1P54687 386 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 FAM209AQ5JX71 171 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 C4orf50Q6ZRC1 276 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 SATL1Q86VE3 508 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 ITPKCQ96DU7 683 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 KCNK16Q96T55 309 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 MYLK2Q9H1R3 596 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 TMEM39AQ9NV64 488 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 KLHL14Q9P2G3 628 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 HAO1Q9UJM8 370 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 NOX1Q9Y5S8 564 aa19.52■□□□□ 0.72
CCDC50-202ENST00000392456 CAPN9O14815 690 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 VILLO15195 856 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 ODC1P11926 461 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 IL1R2P27930 398 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 TMED10P49755 219 aaKnown RBP19.51■□□□□ 0.71
CCDC50-202ENST00000392456 IFI35P80217 286 aaPredicted RBP19.51■□□□□ 0.71
CCDC50-202ENST00000392456 C1orf53Q5VUE5 145 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 TMCO2Q7Z6W1 182 aaPredicted RBP19.51■□□□□ 0.71
CCDC50-202ENST00000392456 PIGZQ86VD9 579 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 URGCPQ8TCY9 931 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 SUSD3Q96L08 255 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 UROC1Q96N76 676 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 HEPHQ9BQS7 1158 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 DUSP16Q9BY84 665 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 TLE6Q9H808 572 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 HBS1LQ9Y450 684 aaKnown RBP19.51■□□□□ 0.71
CCDC50-202ENST00000392456 PI4K2BG5E9Z4 385 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 TBX10O75333 385 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 LRCH4O75427 683 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 TARSP26639 723 aaKnown RBP19.51■□□□□ 0.71
CCDC50-202ENST00000392456 VPS41P49754 854 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 NDUFV1P49821 464 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 PFKPQ01813 784 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 C15orf59Q2T9L4 293 aaPredicted RBP19.51■□□□□ 0.71
CCDC50-202ENST00000392456 CLEC20AQ6ZU45 233 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 SLC39A3Q9BRY0 314 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 IRF2BPLQ9H1B7 796 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 ELAC1Q9H777 363 aaKnown RBP19.51■□□□□ 0.71
CCDC50-202ENST00000392456 USP29Q9HBJ7 922 aa19.51■□□□□ 0.71
CCDC50-202ENST00000392456 NT5C1B-RDH14C9J2C7 533 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 KRT36O76013 467 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 CYP11A1P05108 521 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 PIM1P11309 404 aaPredicted RBP19.5■□□□□ 0.71
CCDC50-202ENST00000392456 MAN1A1P33908 653 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 MAP3K7CLP57077 242 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 TAP1Q03518 808 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 C11orf74Q86VG3 221 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 RHOT1Q8IXI2 618 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 ABI1Q8IZP0 508 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 RXFP2Q8WXD0 754 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 MED10Q9BTT4 135 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 TXLNGYQ9BZA5 131 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 NDEL1Q9GZM8 345 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 DDX18Q9NVP1 670 aaKnown RBP19.5■□□□□ 0.71
CCDC50-202ENST00000392456 GPC6Q9Y625 555 aaPredicted RBP19.5■□□□□ 0.71
CCDC50-202ENST00000392456 C2CD4BA6NLJ0 364 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 TRAFD1O14545 582 aaPredicted RBP19.5■□□□□ 0.71
CCDC50-202ENST00000392456 DGKIO75912 1065 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 AGTP01019 485 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 NUDT17P0C025 328 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 TFE3P19532 575 aaPredicted RBP19.5■□□□□ 0.71
CCDC50-202ENST00000392456 PPIDQ08752 370 aaKnown RBP19.5■□□□□ 0.71
CCDC50-202ENST00000392456 PIGHQ14442 188 aaPredicted RBP19.5■□□□□ 0.71
CCDC50-202ENST00000392456 KCNT1Q5JUK3 1230 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 CGB2Q6NT52 195 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 VSIG1Q86XK7 387 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 ZMIZ2Q8NF64 920 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 CEP70Q8NHQ1 597 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 B3GALT6Q96L58 329 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 CFAP57Q96MR6 1250 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 SMOQ99835 787 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 HEMGNQ9BXL5 484 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 ADAM33Q9BZ11 813 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 CCDC68Q9H2F9 335 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 ZNF212Q9UDV6 495 aa19.5■□□□□ 0.71
CCDC50-202ENST00000392456 RANBP2P49792 3224 aaKnown RBP19.49■□□□□ 0.71
CCDC50-202ENST00000392456 DAPK3O43293 454 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 HSPA1AP0DMV8 641 aaKnown RBP19.49■□□□□ 0.71
CCDC50-202ENST00000392456 HSPA1BP0DMV9 641 aaKnown RBP19.49■□□□□ 0.71
CCDC50-202ENST00000392456 NPR3P17342 541 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 RPL34P49207 117 aaKnown RBP19.49■□□□□ 0.71
CCDC50-202ENST00000392456 SLC6A3Q01959 620 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 LRP8Q14114 963 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 SMTNL2Q2TAL5 461 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 OVOS1Q6IE37 1185 aa19.49■□□□□ 0.71
CCDC50-202ENST00000392456 TMEM173Q86WV6 379 aaPredicted RBP19.49■□□□□ 0.71
CCDC50-202ENST00000392456 NIPA2Q8N8Q9 360 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms