RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 LGI2Q8N0V4 545 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 AHI1Q8N157 1196 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 CFAP52Q8N1V2 620 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 SLC30A5Q8TAD4 765 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 TBCBQ99426 244 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 CIPCQ9C0C6 399 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 TTYH3Q9C0H2 523 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 MKRN2Q9H000 416 aaKnown RBP11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 ARRDC1-AS1Q9H2J1 176 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 DLL3Q9NYJ7 618 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 STIM2Q9P246 746 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 SLC12A6Q9UHW9 1150 aa11.78□□□□□ -0.52
IGHV4-28-201ENST00000390612 IGHV1OR15-9A0A0B4J2B8 117 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 TCRBV5S1A1TA0A578 114 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 F5H5T6 163 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 PAGE1O75459 146 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 CAVIN2O95810 425 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 F9P00740 461 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 IGLV3-19P01714 112 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 ABCB4P21439 1286 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 PBX1P40424 430 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 PLK1P53350 603 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 NME3Q13232 169 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 AUHQ13825 339 aaKnown RBP11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 ARID5BQ14865 1188 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 FAM102AQ5T9C2 384 aaPredicted RBP11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 TTC39BQ5VTQ0 682 aaPredicted RBP11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 FBXL22Q6P050 247 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 MMS22LQ6ZRQ5 1243 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 C14orf80Q86SX3 495 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 CHSY1Q86X52 802 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 MFN1Q8IWA4 741 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 KDM1BQ8NB78 822 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 MSANTD4Q8NCY6 345 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 CYB5D2Q8WUJ1 264 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 IGSF8Q969P0 613 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 RMDN1Q96DB5 314 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 ALG14Q96F25 216 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 MRGPRX3Q96LB0 322 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 PCMTD1Q96MG8 357 aaPredicted RBP11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 AGPAT1Q99943 283 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 SLC6A17Q9H1V8 727 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 USP36Q9P275 1121 aaKnown RBP11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 BCCIPQ9P287 314 aaKnown RBP eCLIP11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 STAP1Q9ULZ2 295 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 HS3ST4Q9Y661 456 aa11.77□□□□□ -0.53
IGHV4-28-201ENST00000390612 IGLV3-10A0A075B6K4 115 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 SYNJ2BP-COX16A0A087WUM0 186 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 A0A1B0GVM2 712 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 TYW5A2RUC4 315 aaKnown RBP11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 TCAF2A6NFQ2 919 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 C2CD4BA6NLJ0 364 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 DRGXA6NNA5 263 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 PRR5-ARHGAP8B1AHC4 643 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 GOLGA8SH3BPF8 625 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 FOXD2O60548 495 aaPredicted RBP11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 ZNF217O75362 1048 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 ATP5BP06576 529 aaKnown RBP11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 FERP16591 822 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 POLR2EP19388 210 aaKnown RBP11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 MPLP40238 635 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 CSKP41240 450 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 IRAK1P51617 712 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 ATXN1P54253 815 aaKnown RBP11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 ARHGAP8P85298 464 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 LMNB2Q03252 620 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 SLC12A1Q13621 1099 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 STARD3Q14849 445 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 ZSCAN23Q3MJ62 389 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 PITRM1Q5JRX3 1037 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 PEAR1Q5VY43 1037 aaPredicted RBP11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 CXorf57Q6NSI4 855 aaKnown RBP11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 SERPINA13PQ6UXR4 307 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 PRR23CQ6ZRP0 262 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 MON1BQ7L1V2 547 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 LUZP1Q86V48 1076 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 TMPRSS6Q8IU80 811 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 CCAR2Q8N163 923 aaKnown RBP11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 PGBD3Q8N328 593 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 CARNMT1Q8N4J0 409 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 CENPIQ92674 756 aaPredicted RBP11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 SPACA7Q96KW9 195 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 C1orf74Q96LT6 269 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 EDEM3Q9BZQ6 932 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 TKTL2Q9H0I9 626 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 WDCPQ9H6R7 721 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 CD93Q9NPY3 652 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 ITM2CQ9NQX7 267 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 AIPL1Q9NZN9 384 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 COX16Q9P0S2 106 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 KIAA1522Q9P206 1035 aaPredicted RBP11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 USP18Q9UMW8 372 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 PLA2G4CQ9UP65 541 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 TBC1D30Q9Y2I9 924 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 OR51B4Q9Y5P0 310 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 PCDH15Q96QU1 1955 aa11.76□□□□□ -0.53
IGHV4-28-201ENST00000390612 FAM170AA1A519 330 aa11.75□□□□□ -0.53
IGHV4-28-201ENST00000390612 ASLP04424 464 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms