RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 PCDHB2Q9Y5E7 798 aa3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 SIRT4Q9Y6E7 314 aaPredicted RBP3.24□□□□□ -1.89
TRAJ40-201ENST00000390497 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 TMEM247A6NEH6 219 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 PGPEP1LA6NFU8 196 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 TEX22C9J3V5 150 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 H0YIZ8 118 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 GRM8O00222 908 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 CLIC1O00299 241 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 SPTLC2O15270 562 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 USO1O60763 962 aaKnown RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 TIPRLO75663 272 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 RNASEH2AO75792 299 aaKnown RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 TBX18O95935 607 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 MBPP02686 304 aaPredicted RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 CSF1P09603 554 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 ABCD3P28288 659 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 MVDP53602 400 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 ADPRHP54922 357 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 ARF3P61204 181 aaPredicted RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 DCAF7P61962 342 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 WDR5P61964 334 aaKnown RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 ARF1P84077 181 aaKnown RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 ARHGAP8P85298 464 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 PSG6Q00889 435 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 GALNT2Q10471 571 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 EFEMP1Q12805 493 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 PTP4A2Q12974 167 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 MAMLD1Q13495 774 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 CDSNQ15517 529 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 PFKFB3Q16875 520 aaPredicted RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 LRRC24Q50LG9 513 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 CCDC30Q5VVM6 783 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 HAUS3Q68CZ6 603 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 CEP85Q6P2H3 762 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 KIRREL2Q6UWL6 708 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 DPY19L3Q6ZPD9 716 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 FASTKD5Q7L8L6 764 aaKnown RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 SLC29A4Q7RTT9 530 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 ADGRG6Q86SQ4 1221 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 RPAP2Q8IXW5 612 aaPredicted RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 DIS3L2Q8IYB7 885 aaKnown RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 C16orf71Q8IYS4 520 aaPredicted RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 ULK2Q8IYT8 1036 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 NGEFQ8N5V2 710 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 LINC01465Q8N7H1 131 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 LSM14AQ8ND56 463 aaKnown RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 CAGE1Q8TC20 777 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 DAZAP1Q96EP5 407 aaKnown RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 P2RY11Q96G91 374 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 HIC2Q96JB3 615 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 PDLIM2Q96JY6 352 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 NEUROD6Q96NK8 337 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 TRIM31Q9BZY9 425 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 CIPCQ9C0C6 399 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 ERVK-5Q9HDB9 667 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 SLC22A11Q9NSA0 550 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 MTMR4Q9NYA4 1195 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 HSF4Q9ULV5 492 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 OSGIN2Q9Y236 505 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 B3GNT3Q9Y2A9 372 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 RABGAP1Q9Y3P9 1069 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 TTLL3Q9Y4R7 772 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 HEMK1Q9Y5R4 338 aaPredicted RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 EPN1Q9Y6I3 576 aaPredicted RBP3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 COL4A3Q01955 1670 aa3.23□□□□□ -1.89
TRAJ40-201ENST00000390497 PI4KAP2A4QPH2 592 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 TMEM191CA6NGB0 347 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 FAM90A7PA6NKC0 464 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 FAM90A22PA8MWA6 464 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 FAM90A12PA8MX19 464 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 FAM90A23PA8MXZ1 464 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 H7C1Q1 480 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 TNPO2O14787 897 aaKnown RBP3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 DSCR3O14972 297 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 FYB1O15117 783 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 PRAMEF2O60811 474 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 JTBO76095 146 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 F9P00740 461 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 EBLN1P0CF75 366 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 UBL4AP11441 157 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 CYP4B1P13584 511 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 APEHP13798 732 aaKnown RBP3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 PKMP14618 531 aaKnown RBP3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 TGM2P21980 687 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 RPS6KB1P23443 525 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 GSTM2P28161 218 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 ADRA1BP35368 520 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 POLD2P49005 469 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 RARRES1P49788 294 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 CCT4P50991 539 aaKnown RBP3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 CCR9P51686 369 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 RAE1P78406 368 aaKnown RBP3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 EIF4A2Q14240 407 aaKnown RBP3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 KRT32Q14532 448 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 ZNF169Q14929 603 aaPredicted RBP3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 MFSD13AQ14CX5 517 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 PRICKLE4Q2TBC4 344 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 FBLN7Q53RD9 439 aa3.22□□□□□ -1.89
TRAJ40-201ENST00000390497 RNASE12Q5GAN4 147 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms