RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 FAM46DQ8NEK8 389 aa6.72□□□□□ -1.33
NEDD9-202ENST00000379446 PRR11Q96HE9 360 aaPredicted RBP6.72□□□□□ -1.33
NEDD9-202ENST00000379446 DNAJC1Q96KC8 554 aaKnown RBP6.72□□□□□ -1.33
NEDD9-202ENST00000379446 ATP6V1G3Q96LB4 118 aa6.72□□□□□ -1.33
NEDD9-202ENST00000379446 OSBPL1AQ9BXW6 950 aa6.72□□□□□ -1.33
NEDD9-202ENST00000379446 IKZF4Q9H2S9 585 aa6.72□□□□□ -1.33
NEDD9-202ENST00000379446 NRDE2Q9H7Z3 1164 aa6.72□□□□□ -1.33
NEDD9-202ENST00000379446 FBXL12Q9NXK8 326 aa6.72□□□□□ -1.33
NEDD9-202ENST00000379446 CDH7Q9ULB5 785 aa6.72□□□□□ -1.33
NEDD9-202ENST00000379446 ZNF510Q9Y2H8 683 aa6.72□□□□□ -1.33
NEDD9-202ENST00000379446 DNAJC13O75165 2243 aa6.72□□□□□ -1.33
NEDD9-202ENST00000379446 FAM95CA0A1B0GW59 222 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 GRID2IPA4D2P6 1211 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 AGPSO00116 658 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 PDXKO00764 312 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 MDM4O15151 490 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 ADH5P11766 374 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 GARSP41250 739 aaKnown RBP6.71□□□□□ -1.33
NEDD9-202ENST00000379446 PPP3CCP48454 512 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 TUBP50607 506 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 PTPN5P54829 565 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 CAMK2GQ13555 558 aaPredicted RBP6.71□□□□□ -1.33
NEDD9-202ENST00000379446 DRAP1Q14919 205 aaPredicted RBP6.71□□□□□ -1.33
NEDD9-202ENST00000379446 ACAP2Q15057 778 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 Q4G0T1 1027 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 TRIM61Q5EBN2 209 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 ANKS6Q68DC2 871 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 ZNF571Q7Z3V5 609 aaPredicted RBP6.71□□□□□ -1.33
NEDD9-202ENST00000379446 SERINC5Q86VE9 423 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 ANKS1AQ92625 1134 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 ARHGEF2Q92974 986 aaKnown RBP6.71□□□□□ -1.33
NEDD9-202ENST00000379446 HEMGNQ9BXL5 484 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 PHPT1Q9NRX4 125 aaPredicted RBP6.71□□□□□ -1.33
NEDD9-202ENST00000379446 NOP53Q9NZM5 478 aaKnown RBP6.71□□□□□ -1.33
NEDD9-202ENST00000379446 PGAP2Q9UHJ9 254 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 INTUQ9ULD6 942 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 CASP8AP2Q9UKL3 1982 aa6.71□□□□□ -1.33
NEDD9-202ENST00000379446 P4HA2O15460 535 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 STBD1O95210 358 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 MSH3P20585 1137 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 OC90Q02509 493 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 MUM1Q2TAK8 710 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 TFDP3Q5H9I0 405 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 ANKS1BQ7Z6G8 1248 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 RABEPKQ7Z6M1 372 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 PRSS58Q8IYP2 241 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 SYT2Q8N9I0 419 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 LPCAT1Q8NF37 534 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 OR6K2Q8NGY2 324 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 DEPDC1BQ8WUY9 529 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 RLN3Q8WXF3 142 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 CPA5Q8WXQ8 436 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 SLC5A5Q92911 643 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 SEC16BQ96JE7 1060 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 SERAC1Q96JX3 654 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 PBKQ96KB5 322 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 KLHL5Q96PQ7 755 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 TMEM175Q9BSA9 504 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 ACTR5Q9H9F9 607 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 ZDHHC4Q9NPG8 344 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 CACNA2D2Q9NY47 1150 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 BFARQ9NZS9 450 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 MYH15Q9Y2K3 1946 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 COL6A1P12109 1028 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 CHRM3P20309 590 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 PAX3P23760 479 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 MZF1P28698 734 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 SLC44A4Q53GD3 710 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 PRAMEF14Q5SWL7 426 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 SPOPLQ6IQ16 392 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 SLC30A9Q6PML9 568 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 WDR49Q8IV35 697 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 FUKQ8N0W3 1084 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 LMX1AQ8TE12 382 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 HAS1Q92839 578 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 ABTB1Q969K4 478 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 HAPLN3Q96S86 360 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 OXCT2Q9BYC2 517 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 FTSJ1Q9UET6 329 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 DAAM1Q9Y4D1 1078 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 DUOX1Q9NRD9 1551 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 ZNF142P52746 1687 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 TMEM247A6NEH6 219 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 B4DGG1 531 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 RGS16O15492 202 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 SLITRK3O94933 977 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 HNRNPA1P09651 372 aaKnown RBP eCLIP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 ESRRAP11474 423 aaPredicted RBP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 ALDH3A1P30838 453 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 CORO1AP31146 461 aaKnown RBP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 CHRNA3P32297 505 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 KRT20P35900 424 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 GALCP54803 685 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 ROR1Q01973 937 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 KCNA1Q09470 495 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 SMAD4Q13485 552 aaKnown RBP6.71□□□□□ -1.34
NEDD9-202ENST00000379446 DGKKQ5KSL6 1271 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 TRIM59Q8IWR1 403 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 COLGALT2Q8IYK4 626 aa6.71□□□□□ -1.34
NEDD9-202ENST00000379446 SLC30A5Q8TAD4 765 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 283.1 ms