RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 BCCIPQ9P287 314 aaKnown RBP eCLIP18.03■□□□□ 0.48
SSBP3-203ENST00000371319 NOVA2Q9UNW9 492 aaKnown RBP18.03■□□□□ 0.48
SSBP3-203ENST00000371319 CLUHO75153 1309 aa18.03■□□□□ 0.48
SSBP3-203ENST00000371319 SLC12A8A0AV02 714 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 TLDC2A0PJX2 215 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 SMIM23A6NLE4 172 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 STK10O94804 968 aaKnown RBP18.02■□□□□ 0.48
SSBP3-203ENST00000371319 APOEP02649 317 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 MX2P20592 715 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 FDFT1P37268 417 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 GARSP41250 739 aaKnown RBP18.02■□□□□ 0.48
SSBP3-203ENST00000371319 TUBP50607 506 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 GPX6P59796 221 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 LONRF1Q17RB8 773 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 BBS9Q3SYG4 887 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 TNFAIP8L3Q5GJ75 292 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 EMC10Q5UCC4 262 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 KDM7AQ6ZMT4 941 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 MIB1Q86YT6 1006 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 ARHGAP12Q8IWW6 846 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 GPR65Q8IYL9 337 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 PDIK1LQ8N165 341 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 ZNF567Q8N184 647 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 ATP6V0D2Q8N8Y2 350 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 DEPDC1BQ8WUY9 529 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 CELF6Q96J87 481 aaKnown RBP18.02■□□□□ 0.48
SSBP3-203ENST00000371319 CATSPERBQ9H7T0 1116 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 CYP4F11Q9HBI6 524 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 SEPT10Q9P0V9 454 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 FNIP2Q9P278 1114 aa18.02■□□□□ 0.48
SSBP3-203ENST00000371319 PLXNA4Q9HCM2 1894 aa18.02■□□□□ 0.47
SSBP3-203ENST00000371319 A0A087WUV0 522 aaPredicted RBP18.01■□□□□ 0.47
SSBP3-203ENST00000371319 WASH4PA8MWX3 477 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 TLR5O60602 858 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 NR1D1P20393 614 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 DNAJB2P25686 324 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 PTPN3P26045 913 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 SLCO1A2P46721 670 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 MS4A13Q5J8X5 152 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 TMEM240Q5SV17 173 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 AFMIDQ63HM1 303 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 ZNF534Q76KX8 674 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 CAND1Q86VP6 1230 aaKnown RBP18.01■□□□□ 0.47
SSBP3-203ENST00000371319 AGGF1Q8N302 714 aaeCLIP18.01■□□□□ 0.472e-6■□□□□ 9.7
SSBP3-203ENST00000371319 FIBCD1Q8N539 461 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 FBXO36Q8NEA4 188 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 PDZD8Q8NEN9 1154 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 DPF3Q92784 378 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 SERPINB12Q96P63 405 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 FERMT1Q9BQL6 677 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 CEP41Q9BYV8 373 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 FRMD8Q9BZ67 464 aaPredicted RBP18.01■□□□□ 0.47
SSBP3-203ENST00000371319 ZBP1Q9H171 429 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 RXFP1Q9HBX9 757 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 MRPL17Q9NRX2 175 aaKnown RBP18.01■□□□□ 0.47
SSBP3-203ENST00000371319 PSD3Q9NYI0 1048 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 CXXC1Q9P0U4 656 aaPredicted RBP18.01■□□□□ 0.47
SSBP3-203ENST00000371319 PCDHB12Q9Y5F1 795 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 SHROOM3Q8TF72 1996 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 NUP205Q92621 2012 aa18.01■□□□□ 0.47
SSBP3-203ENST00000371319 NYNRINQ9P2P1 1898 aaKnown RBP18.01■□□□□ 0.47
SSBP3-203ENST00000371319 FGF18O76093 207 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 APRTP07741 180 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 HMBSP08397 361 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 CSH1P0DML2 217 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 CSH2P0DML3 217 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 MAGOHP61326 146 aaKnown RBP18■□□□□ 0.47
SSBP3-203ENST00000371319 SKOR1P84550 965 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 RING1Q06587 406 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 MTM1Q13496 603 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 STAT4Q14765 748 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 DNAJC21Q5F1R6 531 aaKnown RBP18■□□□□ 0.47
SSBP3-203ENST00000371319 NLRP14Q86W24 1093 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 IGDCC3Q8IVU1 814 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 PYROXD1Q8WU10 500 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 BTN2A3PQ96KV6 586 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 MYRFLQ96LU7 910 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 IGSF9Q9P2J2 1179 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 PRKAG2Q9UGJ0 569 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 DOCK4Q8N1I0 1966 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 ZNF840PA6NDX5 716 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 KCNK1O00180 336 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 RGS16O15492 202 aaPredicted RBP18■□□□□ 0.47
SSBP3-203ENST00000371319 AVILO75366 819 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 TSHRP16473 764 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 ELK3P41970 407 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 ALDH1A3P47895 512 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 IRAK1P51617 712 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 IFI35P80217 286 aaPredicted RBP18■□□□□ 0.47
SSBP3-203ENST00000371319 SKIDA1Q1XH10 827 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 PARP6Q2NL67 630 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 LZTR1Q8N653 840 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 RTL3Q8N8U3 475 aaKnown RBP18■□□□□ 0.47
SSBP3-203ENST00000371319 CLP1Q92989 425 aaKnown RBP18■□□□□ 0.47
SSBP3-203ENST00000371319 TRMT2BQ96GJ1 504 aaKnown RBP18■□□□□ 0.47
SSBP3-203ENST00000371319 CDK5RAP1Q96SZ6 601 aaKnown RBP18■□□□□ 0.47
SSBP3-203ENST00000371319 PRMT1Q99873 361 aaKnown RBP18■□□□□ 0.47
SSBP3-203ENST00000371319 SLC39A8Q9C0K1 460 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 VPS37BQ9H9H4 285 aa18■□□□□ 0.47
SSBP3-203ENST00000371319 EIF2B3Q9NR50 452 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms