RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 RBM15BQ8NDT2 890 aaKnown RBP18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 NT5C3BQ969T7 300 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 MIEF2Q96C03 454 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 FCRL3Q96P31 734 aaPredicted RBP18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 KRT82Q9NSB4 513 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 RCOR3Q9P2K3 495 aaPredicted RBP18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 LRRC42Q9Y546 428 aa18.58■□□□□ 0.57
UBQLN4-201ENST00000368309 PRR5-ARHGAP8B1AHC4 643 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 ERCC2P18074 760 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 AXLP30530 894 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 ABCG1P45844 678 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 GLUD2P49448 558 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 ARHGAP8P85298 464 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 CYS1Q717R9 158 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 RASSF3Q86WH2 238 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 AZIN2Q96A70 460 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 CLPTM1LQ96KA5 538 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 TXNDC16Q9P2K2 825 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 GNEQ9Y223 722 aaKnown RBP18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 DNAJC16Q9Y2G8 782 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 SNX10Q9Y5X0 201 aa18.58■□□□□ 0.56
UBQLN4-201ENST00000368309 XKR4Q5GH76 650 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 KYAT3Q6YP21 454 aaKnown RBP18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 ATG14Q6ZNE5 492 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 CMC1Q7Z7K0 106 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 FERMT1Q9BQL6 677 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 DDX43Q9NXZ2 648 aaKnown RBP18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 WARSP23381 471 aaKnown RBP18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 CNTFP26441 200 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 TYK2P29597 1187 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 ADRA1BP35368 520 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 GPRIN1Q7Z2K8 1008 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 ZNF778Q96MU6 729 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 FAM161BQ96MY7 647 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 APOL2Q9BQE5 337 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 FLRT1Q9NZU1 646 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 PPP1R12AO14974 1030 aaPredicted RBP18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 PLIN3O60664 434 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 USP17L7P0C7H9 530 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 ABL2P42684 1182 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 PSEN2P49810 448 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 ADAM17P78536 824 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 DPYSQ14117 519 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 MBLAC2Q68D91 279 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 C10orf107Q8IVU9 208 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 CRTAC1Q9NQ79 661 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 TMEM30AQ9NV96 361 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 TMEM216Q9P0N5 145 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 CPA4Q9UI42 421 aa18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 RPL26L1Q9UNX3 145 aaKnown RBP18.57■□□□□ 0.56
UBQLN4-201ENST00000368309 POLBP06746 335 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 FGF3P11487 239 aaPredicted RBP18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 NCAM1P13591 858 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 SLC1A6P48664 564 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 THOC5Q13769 683 aaKnown RBP18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 TOP6BLQ8N6T0 577 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 ATP2A3Q93084 1043 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 DNAI2Q9GZS0 605 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 TRIP12Q14669 1992 aaPredicted RBP18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 MYBPHLA2RUH7 354 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 CACNA2D1P54289 1103 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 PCBP1Q15365 356 aaKnown RBP eCLIP18.56■□□□□ 0.561e-6■□□□□ 11.3
UBQLN4-201ENST00000368309 TEDDM1Q5T9Z0 273 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 PSTKQ8IV42 348 aaKnown RBP18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 DNAAF3Q8N9W5 541 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 EDEM1Q92611 657 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 DCLK1O15075 740 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 SKAP2O75563 359 aaPredicted RBP18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 FAM200BP0CF97 657 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 AGAP2Q99490 1192 aa18.56■□□□□ 0.56
UBQLN4-201ENST00000368309 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 GLRA3O75311 464 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 PTPN3P26045 913 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 MXRA7P84157 204 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 PAFAH1B3Q15102 231 aaKnown RBP18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 ANKRD23Q86SG2 305 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 TMPRSS6Q8IU80 811 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 TNS4Q8IZW8 715 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 PIWIL2Q8TC59 973 aaKnown RBP18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 CERS2Q96G23 380 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 THTPAQ9BU02 230 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 EIF2B3Q9NR50 452 aaKnown RBP18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 PNPOQ9NVS9 261 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 UBP1Q9NZI7 540 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 ATP9BO43861 1147 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 TBX10O75333 385 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 AP1G2O75843 785 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 LMNAP02545 664 aaKnown RBP18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 YY1P25490 414 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 CCL14Q16627 93 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 WDR75Q8IWA0 830 aaKnown RBP18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 NPWQ8N729 165 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 ZNF669Q96BR6 464 aaPredicted RBP18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 SENP8Q96LD8 212 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 SLC2A13Q96QE2 648 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 CCDC106Q9BWC9 280 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 RHOBTB2Q9BYZ6 727 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 DDIT4Q9NX09 232 aa18.55■□□□□ 0.56
UBQLN4-201ENST00000368309 DCDC2Q9UHG0 476 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms