RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 MTRRQ9UBK8 725 aa14.29□□□□□ -0.12
CSNK1E-201ENST00000359867 PCDHA11Q9Y5I1 949 aa14.29□□□□□ -0.12
CSNK1E-201ENST00000359867 BCLAF3A2AJT9 711 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 WDR27A2RRH5 827 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 H7C0C1 242 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 H7C4K7 107 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 ATP5OP48047 213 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 NR2C2P49116 596 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 MYO9BQ13459 2157 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 RNF19BQ6ZMZ0 732 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 SPATA2LQ8IUW3 424 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 NAT8LQ8N9F0 302 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 FAM71DQ8N9W8 422 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 DRAXINQ8NBI3 349 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 STKLD1Q8NE28 680 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 ZBP1Q9H171 429 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 NKX2-4Q9H2Z4 354 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 SAYSD1Q9NPB0 183 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 TBK1Q9UHD2 729 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 FZD10Q9ULW2 581 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 PTPRDP23468 1912 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 TMEM120BA0PK00 339 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 OR6C75A6NL08 312 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 A8MUI8 341 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 SOAT2O75908 522 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 DAOAP59103 153 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 ERVFC1P60507 584 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 ITIH4Q14624 930 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 DCAF6Q58WW2 860 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 C1orf228Q6PIY5 440 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 C4orf22Q6V702 233 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 TMC7Q7Z402 723 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 DCP1BQ8IZD4 617 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 TDHQ8IZJ6 230 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 ZMIZ2Q8NF64 920 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 CPT1BQ92523 772 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 ARHGEF2Q92974 986 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 YIPF3Q9GZM5 350 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 CRISPLD1Q9H336 500 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 MTMR10Q9NXD2 777 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 RRN3Q9NYV6 651 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 LMCD1Q9NZU5 365 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 SLC27A5Q9Y2P5 690 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 SZT2Q5T011 3432 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 VNN2O95498 520 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 RGS19P49795 217 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 NDUFV1P49821 464 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 AIF1P55008 147 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 ARL4CP56559 192 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 MAPRE1Q15691 268 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 PPP6R3Q5H9R7 873 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 NUGGCQ68CJ6 796 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 BZW1Q7L1Q6 419 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 ZC3H18Q86VM9 953 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 SCML4Q8N228 414 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 POF1BQ8WVV4 589 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 PAIP2Q9BPZ3 127 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 C10orf88Q9H8K7 445 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 USP29Q9HBJ7 922 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 MRPL17Q9NRX2 175 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 PAK5Q9P286 719 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 TRIM33Q9UPN9 1127 aa14.28□□□□□ -0.12
CSNK1E-201ENST00000359867 HHLA1C9JL84 531 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 GRM6O15303 877 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 GPR15P49685 360 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 ATXN1P54253 815 aaKnown RBP14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 CBLBQ13191 982 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 SDHAF4Q5VUM1 108 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 TAOK1Q7L7X3 1001 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 GPRIN1Q7Z2K8 1008 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 CCDC185Q8N715 623 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 SPPL3Q8TCT6 385 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 IRGQQ8WZA9 623 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 C9orf72Q96LT7 481 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 KCTD15Q96SI1 283 aaPredicted RBP14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 TCF25Q9BQ70 676 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 ULBP1Q9BZM6 244 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 MTMR11A4FU01 709 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 CARNS1A5YM72 827 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 SNX3O60493 162 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 CTSAP10619 480 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 ARL4AP40617 200 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 USP4Q13107 963 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 GPR17Q13304 367 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 HIF1AQ16665 826 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 PLPP4Q5VZY2 271 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 CAPRIN2Q6IMN6 1127 aaKnown RBP14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 SLC8B1Q6J4K2 584 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 C4orf50Q6ZRC1 276 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 CDKL3Q8IVW4 592 aaPredicted RBP14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 SCN4BQ8IWT1 228 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 RIBC1Q8N443 379 aaPredicted RBP14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 NSMCE1Q8WV22 266 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 NDRG1Q92597 394 aaKnown RBP14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 RSRC1Q96IZ7 334 aaKnown RBP14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 CSPG4P5Q96PW8 444 aa14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 TGS1Q96RS0 853 aaKnown RBP14.27□□□□□ -0.13
CSNK1E-201ENST00000359867 NSRP1Q9H0G5 558 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms