RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 UNC5AQ6ZN44 842 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 TMEM192Q8IY95 271 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 NIPA2Q8N8Q9 360 aa19.13■□□□□ 0.65
SCARF1-202ENST00000348987 TUT1Q9H6E5 874 aaKnown RBP19.13■□□□□ 0.65
SCARF1-202ENST00000348987 B4GALT5O43286 388 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 OSBPP22059 807 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 ICAM3P32942 547 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 ROR1Q01973 937 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 KLF10Q13118 480 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 CAND1Q86VP6 1230 aaKnown RBP19.12■□□□□ 0.65
SCARF1-202ENST00000348987 NLRP7Q8WX94 980 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 CDRT15Q96T59 188 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 ACO2Q99798 780 aaKnown RBP19.12■□□□□ 0.65
SCARF1-202ENST00000348987 RTKNQ9BST9 563 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 HAUS8Q9BT25 410 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 RNF11Q9Y3C5 154 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 CHADO15335 359 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 LSM8O95777 96 aaKnown RBP19.12■□□□□ 0.65
SCARF1-202ENST00000348987 KRT7P08729 469 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 HOXC6P09630 235 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 ZFXP17010 805 aaPredicted RBP19.12■□□□□ 0.65
SCARF1-202ENST00000348987 SERPINB5P36952 375 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 CLCN2P51788 898 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 PDAP1Q13442 181 aaKnown RBP19.12■□□□□ 0.65
SCARF1-202ENST00000348987 DUOXA2Q1HG44 320 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 ZNF699Q32M78 642 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 C10orf107Q8IVU9 208 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 TRAPPC12Q8WVT3 735 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 APBB2Q92870 758 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 KCNN1Q92952 543 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 BIRC8Q96P09 236 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 CAAP1Q9H8G2 361 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 ZNHIT2Q9UHR6 403 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 CLEC11AQ9Y240 323 aa19.12■□□□□ 0.65
SCARF1-202ENST00000348987 RBM47A0AV96 593 aaKnown RBP19.11■□□□□ 0.65
SCARF1-202ENST00000348987 APRTP07741 180 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 MYL4P12829 197 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 IDO1P14902 403 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 MS4A2Q01362 244 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 LAMTOR4Q0VGL1 99 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 MMRN1Q13201 1228 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 TRPC3Q13507 836 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 PPP1R2P3Q6NXS1 205 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 ZPBP2Q6X784 338 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 BHLHE22Q8NFJ8 381 aaPredicted RBP19.11■□□□□ 0.65
SCARF1-202ENST00000348987 ABHD8Q96I13 439 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 CPXM1Q96SM3 734 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 CORO1BQ9BR76 489 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 HMGXB4Q9UGU5 601 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 SLC15A5A6NIM6 579 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 NOP56O00567 594 aaKnown RBP19.11■□□□□ 0.65
SCARF1-202ENST00000348987 MAFO75444 373 aaPredicted RBP19.11■□□□□ 0.65
SCARF1-202ENST00000348987 KRT3P12035 628 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 NDST2P52849 883 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 PKNOX1P55347 436 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 PFKPQ01813 784 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 RELAQ04206 551 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 PCLAFQ15004 111 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 DHRS4L2Q6PKH6 230 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 MRPL4Q9BYD3 311 aaKnown RBP19.11■□□□□ 0.65
SCARF1-202ENST00000348987 HOXC10Q9NYD6 342 aa19.11■□□□□ 0.65
SCARF1-202ENST00000348987 CPSF3Q9UKF6 684 aaKnown RBP19.11■□□□□ 0.65
SCARF1-202ENST00000348987 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.11■□□□□ 0.65
SCARF1-202ENST00000348987 POLR2AP24928 1970 aaKnown RBP19.11■□□□□ 0.65
SCARF1-202ENST00000348987 CFLARO15519 480 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 SERPINB7O75635 380 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 SERPINE1P05121 402 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 EPHA3P29320 983 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 HADHQ16836 314 aaKnown RBP19.1■□□□□ 0.65
SCARF1-202ENST00000348987 HSDL1Q3SXM5 330 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 RAB6CQ53S08 254 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 TMEM126BQ8IUX1 230 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 GSDMBQ8TAX9 411 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 LRRN4Q8WUT4 740 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 USP13Q92995 863 aaPredicted RBP19.1■□□□□ 0.65
SCARF1-202ENST00000348987 RANBP9Q96S59 729 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 DCUN1D5Q9BTE7 237 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 RAB6CQ9H0N0 254 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 EPS15L1Q9UBC2 864 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 C7orf72A4D263 438 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 SOWAHBA6NEL2 793 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 C19orf81C9J6K1 198 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 H7C0C1 242 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 OGTO15294 1046 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 CBFA2T3O75081 653 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 PRKCBP05771 671 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 KRT19P08727 400 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 PHKA2P46019 1235 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 ATP5OP48047 213 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 ALDH3B2P48448 385 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 HSPA13P48723 471 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 TGFBIQ15582 683 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 TAZQ16635 292 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 PPM1LQ5SGD2 360 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 EEF1DP3Q658K8 133 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 MPP5Q8N3R9 675 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 DEPDC1BQ8WUY9 529 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 TWNKQ96RR1 684 aa19.1■□□□□ 0.65
SCARF1-202ENST00000348987 INO80BQ9C086 356 aaPredicted RBP19.1■□□□□ 0.65
SCARF1-202ENST00000348987 COG4Q9H9E3 785 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms