RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SYPL2Q5VXT5 272 aa14.29□□□□□ -0.12
TPM4-202ENST00000344824 MAMSTRQ6ZN01 415 aa14.29□□□□□ -0.12
TPM4-202ENST00000344824 LONP2Q86WA8 852 aa14.29□□□□□ -0.12
TPM4-202ENST00000344824 PHTF2Q8N3S3 785 aa14.29□□□□□ -0.12
TPM4-202ENST00000344824 TPCN2Q8NHX9 752 aa14.29□□□□□ -0.12
TPM4-202ENST00000344824 ALS2CR12Q96Q35 445 aa14.29□□□□□ -0.12
TPM4-202ENST00000344824 TPSD1Q9BZJ3 242 aa14.29□□□□□ -0.12
TPM4-202ENST00000344824 NCDNQ9UBB6 729 aa14.29□□□□□ -0.12
TPM4-202ENST00000344824 RAB23Q9ULC3 237 aa14.29□□□□□ -0.12
TPM4-202ENST00000344824 MMP17Q9ULZ9 603 aa14.29□□□□□ -0.12
TPM4-202ENST00000344824 HYOU1Q9Y4L1 999 aa14.29□□□□□ -0.12
TPM4-202ENST00000344824 GPR179Q6PRD1 2367 aa14.29□□□□□ -0.12
TPM4-202ENST00000344824 GVINP1Q7Z2Y8 2422 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 CEP192Q8TEP8 1941 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 GOLGA6L7A0A1B0GV03 622 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 SIGLEC16A6NMB1 481 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 ZNF500O60304 480 aaPredicted RBP14.28□□□□□ -0.12
TPM4-202ENST00000344824 BUB1BO60566 1050 aaPredicted RBP14.28□□□□□ -0.12
TPM4-202ENST00000344824 FTCDO95954 541 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 APOEP02649 317 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 FYNP06241 537 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 SLC11A2P49281 568 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 DGKEP52429 567 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 GSCP56915 257 aaPredicted RBP14.28□□□□□ -0.12
TPM4-202ENST00000344824 YWHAZP63104 245 aaKnown RBP14.28□□□□□ -0.12
TPM4-202ENST00000344824 PITX1P78337 314 aaPredicted RBP14.28□□□□□ -0.12
TPM4-202ENST00000344824 MRPS21P82921 87 aaKnown RBP14.28□□□□□ -0.12
TPM4-202ENST00000344824 FYB2Q5VWT5 728 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 ANO7Q6IWH7 933 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 RFWD3Q6PCD5 774 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 SYT10Q6XYQ8 523 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 SYT13Q7L8C5 426 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 DAAM2Q86T65 1068 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 ZDHHC17Q8IUH5 632 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 UNC45BQ8IWX7 931 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 DEFB106AQ8N104 65 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 CPXM2Q8N436 756 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 RNF10Q8N5U6 811 aaKnown RBP14.28□□□□□ -0.12
TPM4-202ENST00000344824 IL17RCQ8NAC3 791 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 ZNF592Q92610 1267 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 RNF34Q969K3 372 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 SEMA4AQ9H3S1 761 aa14.28□□□□□ -0.12
TPM4-202ENST00000344824 BCCIPQ9P287 314 aaKnown RBP eCLIP14.28□□□□□ -0.12
TPM4-202ENST00000344824 TYW5A2RUC4 315 aaKnown RBP14.27□□□□□ -0.12
TPM4-202ENST00000344824 SGK1O00141 431 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 IRAK2O43187 625 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 ACSL4O60488 711 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 LILRB5O75023 590 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 HSF2BPO75031 334 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 MTA2O94776 668 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 APBB3O95704 486 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 TRUB2O95900 331 aaKnown RBP14.27□□□□□ -0.12
TPM4-202ENST00000344824 PENKP01210 267 aaPredicted RBP14.27□□□□□ -0.12
TPM4-202ENST00000344824 TNNT1P13805 278 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 RFC1P35251 1148 aaPredicted RBP14.27□□□□□ -0.12
TPM4-202ENST00000344824 TNFRSF4P43489 277 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 OGDHQ02218 1023 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 SIM2Q14190 667 aaPredicted RBP14.27□□□□□ -0.12
TPM4-202ENST00000344824 MPPE1Q53F39 396 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 EFHC1Q5JVL4 640 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 PPP1R15BQ5SWA1 713 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 EGFLAMQ63HQ2 1017 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 NYAP1Q6ZVC0 841 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 WDR5BQ86VZ2 330 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 CPNE8Q86YQ8 564 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 NELL1Q92832 810 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 P2RY11Q96G91 374 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 FCRL2Q96LA5 508 aaPredicted RBP14.27□□□□□ -0.12
TPM4-202ENST00000344824 WDR24Q96S15 920 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 DDIT4Q9NX09 232 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 STIM2Q9P246 746 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 DNAI1Q9UI46 699 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 TLR6Q9Y2C9 796 aa14.27□□□□□ -0.12
TPM4-202ENST00000344824 FRYLO94915 3013 aa14.27□□□□□ -0.13
TPM4-202ENST00000344824 NYNRINQ9P2P1 1898 aaKnown RBP14.27□□□□□ -0.13
TPM4-202ENST00000344824 TCRBV21S2A2A0A5A6 115 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 TMEM191CA6NGB0 347 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 PRRT4C9JH25 899 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 MYO1FO00160 1098 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 AXIN1O15169 862 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 TBL1XO60907 577 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 DAB1O75553 588 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 LATS1O95835 1130 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 GPD1P21695 349 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 PSMA2P25787 234 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 FLT3P36888 993 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 KIR2DL1P43626 348 aaPredicted RBP14.26□□□□□ -0.13
TPM4-202ENST00000344824 DNA2P51530 1060 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 SGSHP51688 502 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 NME3Q13232 169 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 TCEAL1Q15170 157 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 ZC3H12AQ5D1E8 599 aaKnown RBP14.26□□□□□ -0.13
TPM4-202ENST00000344824 EOGTQ5NDL2 527 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 ADGRF1Q5T601 910 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 DAB2IPQ5VWQ8 1189 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 TRNP1Q6NT89 227 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 SLC26A9Q7LBE3 791 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 TRMT11Q7Z4G4 463 aaKnown RBP14.26□□□□□ -0.13
TPM4-202ENST00000344824 ANKS1BQ7Z6G8 1248 aa14.26□□□□□ -0.13
TPM4-202ENST00000344824 CHSY1Q86X52 802 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms