RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 LRRTM3Q86VH5 581 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 RNF168Q8IYW5 571 aaPredicted RBP13.09□□□□□ -0.31
VANGL1-201ENST00000310260 STMN2Q93045 179 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 BTBD6Q96KE9 485 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 NT5C1AQ9BXI3 368 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 TRABDQ9H4I3 376 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 ANAPC5Q9UJX4 755 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 COMMD3-BMI1R4GMX3 469 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 PRRC2BQ5JSZ5 2229 aaKnown RBP13.09□□□□□ -0.31
VANGL1-201ENST00000310260 PLXNA4Q9HCM2 1894 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 CLDN5O00501 218 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 GABRDO14764 452 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 CILPO75339 1184 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 FAM163BP0C2L3 166 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 PTPN1P18031 435 aaKnown RBP13.09□□□□□ -0.31
VANGL1-201ENST00000310260 ACO1P21399 889 aaKnown RBP13.09□□□□□ -0.31
VANGL1-201ENST00000310260 RRM1P23921 792 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 PCSK1P29120 753 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 DAB2IPQ5VWQ8 1189 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 ADGRD2Q7Z7M1 963 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 DEFB123Q8N688 67 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 CCDC77Q9BR77 488 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 MED10Q9BTT4 135 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 RHOBTB2Q9BYZ6 727 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 MMADHCQ9H3L0 296 aaPredicted RBP13.09□□□□□ -0.31
VANGL1-201ENST00000310260 NGRNQ9NPE2 291 aaKnown RBP13.09□□□□□ -0.31
VANGL1-201ENST00000310260 TMLHEQ9NVH6 421 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 GALNT8Q9NY28 637 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 ABI2Q9NYB9 513 aaPredicted RBP13.09□□□□□ -0.31
VANGL1-201ENST00000310260 SMG5Q9UPR3 1016 aaKnown RBP13.09□□□□□ -0.31
VANGL1-201ENST00000310260 SLC27A5Q9Y2P5 690 aa13.09□□□□□ -0.31
VANGL1-201ENST00000310260 EXOC1LA0A1B0GW35 172 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 GYG2O15488 501 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 HAUS5O94927 633 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 CCDC130P13994 396 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 ETS2P15036 469 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 NRIP1P48552 1158 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 MRPL58Q14197 206 aaKnown RBP13.08□□□□□ -0.32
VANGL1-201ENST00000310260 ENOSF1Q7L5Y1 443 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 LIMS2Q7Z4I7 341 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 C4orf33Q8N1A6 199 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 ATAD1Q8NBU5 361 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 B3GALNT2Q8NCR0 500 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 TMEM176AQ96HP8 235 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 CENPKQ9BS16 269 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 EMILIN2Q9BXX0 1053 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 MTRRQ9UBK8 725 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 NEU2Q9Y3R4 380 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 PRUNE2Q8WUY3 3088 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 TYROBPO43914 113 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 GAS8O95995 478 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 ADORA2BP29275 332 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 VPS41P49754 854 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 INHBCP55103 352 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 CCDC85BQ15834 202 aaPredicted RBP13.08□□□□□ -0.32
VANGL1-201ENST00000310260 FYB2Q5VWT5 728 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 RNF19BQ6ZMZ0 732 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 SLC4A11Q8NBS3 891 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 RFWD2Q8NHY2 731 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.32
VANGL1-201ENST00000310260 MCUR1Q96AQ8 359 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 MRPL38Q96DV4 380 aaKnown RBP13.08□□□□□ -0.32
VANGL1-201ENST00000310260 PRR11Q96HE9 360 aaPredicted RBP13.08□□□□□ -0.32
VANGL1-201ENST00000310260 TNIP3Q96KP6 325 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 KLHL5Q96PQ7 755 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 ACBD6Q9BR61 282 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 HERPUD2Q9BSE4 406 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 CRTAC1Q9NQ79 661 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 STK39Q9UEW8 545 aa13.08□□□□□ -0.32
VANGL1-201ENST00000310260 VWA8A3KMH1 1905 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 OR6C75A6NL08 312 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 LILRB3O75022 631 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 SOAT2O75908 522 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 RFX1P22670 979 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 CA4P22748 312 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 AMPD1P23109 780 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 MAN1A1P33908 653 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 ADCY8P40145 1251 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 INCA1Q0VD86 236 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 ADGRE1Q14246 886 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 IZUMO2Q6UXV1 221 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 RINLQ6ZS11 566 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 MARK2Q7KZI7 788 aaKnown RBP13.07□□□□□ -0.32
VANGL1-201ENST00000310260 SLC47A2Q86VL8 602 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 TDRPQ86YL5 185 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 STKLD1Q8NE28 680 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 SHC3Q92529 594 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 ZNF75CPQ92670 426 aaPredicted RBP13.07□□□□□ -0.32
VANGL1-201ENST00000310260 NUP85Q9BW27 656 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 CDH9Q9ULB4 789 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 SSX2IPQ9Y2D8 614 aa13.07□□□□□ -0.32
VANGL1-201ENST00000310260 CFAP69A5D8W1 941 aa13.06□□□□□ -0.32
VANGL1-201ENST00000310260 ADH1AP07327 375 aa13.06□□□□□ -0.32
VANGL1-201ENST00000310260 ROR1Q01973 937 aa13.06□□□□□ -0.32
VANGL1-201ENST00000310260 THOC5Q13769 683 aaKnown RBP13.06□□□□□ -0.32
VANGL1-201ENST00000310260 INTS6LQ5JSJ4 861 aaKnown RBP13.06□□□□□ -0.32
VANGL1-201ENST00000310260 SPATA2LQ8IUW3 424 aaPredicted RBP13.06□□□□□ -0.32
VANGL1-201ENST00000310260 DCP1BQ8IZD4 617 aaKnown RBP13.06□□□□□ -0.32
VANGL1-201ENST00000310260 TTC9BQ8N6N2 239 aa13.06□□□□□ -0.32
VANGL1-201ENST00000310260 SLC2A14Q8TDB8 520 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms