RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 MAP3K6O95382 1288 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 FGF19O95750 216 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 GOLGA6DP0CG33 693 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 ZNF33AQ06730 810 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 PPP2R2DQ66LE6 453 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 ITPRIPL1Q6GPH6 555 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 CHSY1Q86X52 802 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 KREMEN2Q8NCW0 462 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 MRPS31Q92665 395 aaKnown RBP11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 KLHL5Q96PQ7 755 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 TGS1Q96RS0 853 aaKnown RBP11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 RBM15Q96T37 977 aaKnown RBP eCLIP11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 VAT1Q99536 393 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 C17orf80Q9BSJ5 609 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 MAGEB5Q9BZ81 275 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 ZYG11BQ9C0D3 744 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 NKX2-4Q9H2Z4 354 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 RETREG1Q9H6L5 497 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 CCSER2Q9H7U1 834 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 USP29Q9HBJ7 922 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 RAB6BQ9NRW1 208 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 ETNK2Q9NVF9 386 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 HAUS2Q9NVX0 235 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 GOLGA6AQ9NYA3 693 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 SEPT10Q9P0V9 454 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 XPO7Q9UIA9 1087 aaKnown RBP11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 IRAK3Q9Y616 596 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 HS3ST4Q9Y661 456 aa11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 COL4A4P53420 1690 aaPredicted RBP11.72□□□□□ -0.53
CTDSPL-202ENST00000310189 A0A0A0MRY4 1105 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 SPDYE4A6NLX3 237 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 F5H5T6 163 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 CHADO15335 359 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 TGM5O43548 720 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 LILRB3O75022 631 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 ARHGEF15O94989 841 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 TBX18O95935 607 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 C1RP00736 705 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 MYZAPP0CAP1 466 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 RHOQP17081 205 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 HMGA1P17096 107 aaKnown RBP11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 PHBP35232 272 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 GDF10P55107 478 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 SLC10A2Q12908 348 aaPredicted RBP11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 PRPSAP1Q14558 356 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 HIF1AQ16665 826 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 RABGAP1LQ5R372 815 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 PPM1LQ5SGD2 360 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 RNASEH2BQ5TBB1 312 aaKnown RBP11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 PLPP4Q5VZY2 271 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 TIGD7Q6NT04 549 aaPredicted RBP11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 ATPAF2Q8N5M1 289 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 TSEN2Q8NCE0 465 aaKnown RBP11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 NSMCE1Q8WV22 266 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 POF1BQ8WVV4 589 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 EXOC4Q96A65 974 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 SPATA13Q96N96 652 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 OLFM3Q96PB7 478 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 ZIM3Q96PE6 472 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 PPP1R2P1Q96PQ5 205 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 PHACTR1Q9C0D0 580 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 STMN4Q9H169 189 aaPredicted RBP11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 PRDM12Q9H4Q4 367 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 C10orf88Q9H8K7 445 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 ALG13Q9NP73 1137 aaKnown RBP11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 PPARGC1AQ9UBK2 798 aaKnown RBP11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 TRHDEQ9UKU6 1024 aa11.71□□□□□ -0.53
CTDSPL-202ENST00000310189 GREB1Q4ZG55 1949 aa11.71□□□□□ -0.54
CTDSPL-202ENST00000310189 TYW5A2RUC4 315 aaKnown RBP11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 ARHGAP42A6NI28 874 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 DFFAO00273 331 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 C8AP07357 584 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 IVLP07476 585 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 SPATA31D3P0C874 917 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 MBL2P11226 248 aaPredicted RBP11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 CCNCP24863 283 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 CDC25CP30307 473 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 HOXC13P31276 330 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 GGCXP38435 758 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 PGFP49763 221 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 CDK16Q00536 496 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 AUHQ13825 339 aaKnown RBP11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 PRKD1Q15139 912 aaPredicted RBP11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 ANO4Q32M45 955 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 MS4A13Q5J8X5 152 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 ANKRD20A2Q5SQ80 823 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 ANKRD20A1Q5TYW2 823 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 ANKRD20A3Q5VUR7 823 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 RHBDF2Q6PJF5 856 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 SPATA31D4Q6ZUB0 917 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 PID1Q7Z2X4 250 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 PRUNE1Q86TP1 453 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 ZNF354CQ86Y25 554 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 CCDC13Q8IYE1 715 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 IQCKQ8N0W5 287 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 RTL3Q8N8U3 475 aaKnown RBP11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 MRPL43Q8N983 215 aaKnown RBP11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 GLIS1Q8NBF1 620 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 AZIN2Q96A70 460 aa11.7□□□□□ -0.54
CTDSPL-202ENST00000310189 HDAC11Q96DB2 347 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms