RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 HEATR6Q6AI08 1181 aaKnown RBP21.58■■□□□ 1.05
YBX3-202ENST00000279550 CAND1Q86VP6 1230 aaKnown RBP21.58■■□□□ 1.05
YBX3-202ENST00000279550 ZNF473Q8WTR7 871 aaKnown RBP21.58■■□□□ 1.05
YBX3-202ENST00000279550 HTR3CQ8WXA8 447 aa21.58■■□□□ 1.05
YBX3-202ENST00000279550 MRRFQ96E11 262 aaKnown RBP21.58■■□□□ 1.05
YBX3-202ENST00000279550 CCT8L2Q96SF2 557 aa21.58■■□□□ 1.05
YBX3-202ENST00000279550 TEX264Q9Y6I9 313 aa21.58■■□□□ 1.05
YBX3-202ENST00000279550 NDUFAB1O14561 156 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 LILRB3O75022 631 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 PIAS1O75925 651 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 F9P00740 461 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 IGLV3-25P01717 112 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 ATP5DP30049 168 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 TPI1P60174 286 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 YWHAGP61981 247 aaKnown RBP eCLIP21.58■■□□□ 1.04
YBX3-202ENST00000279550 CBLBQ13191 982 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 RIBC1Q8N443 379 aaPredicted RBP21.58■■□□□ 1.04
YBX3-202ENST00000279550 ZNF461Q8TAF7 563 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 FBF1Q8TES7 1133 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 SEPT5Q99719 369 aaPredicted RBP21.58■■□□□ 1.04
YBX3-202ENST00000279550 TKTL2Q9H0I9 626 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.58■■□□□ 1.04
YBX3-202ENST00000279550 FNIP2Q9P278 1114 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 AFF4Q9UHB7 1163 aaKnown RBP21.58■■□□□ 1.04
YBX3-202ENST00000279550 RSPH14Q9UHP6 348 aa21.58■■□□□ 1.04
YBX3-202ENST00000279550 TMEM120BA0PK00 339 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 GMNCA6NCL1 334 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 F5H423 210 aaPredicted RBP21.57■■□□□ 1.04
YBX3-202ENST00000279550 SOAT2O75908 522 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 ABLIM3O94929 683 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 ARHGEF15O94989 841 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 APRTP07741 180 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 HAPLN1P10915 354 aaPredicted RBP21.57■■□□□ 1.04
YBX3-202ENST00000279550 TPGS2Q68CL5 300 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 C4orf22Q6V702 233 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 PPP1R21Q6ZMI0 780 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 C3orf62Q6ZUJ4 267 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 ZNF534Q76KX8 674 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 PALM2Q8IXS6 379 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 SRRM1Q8IYB3 904 aaKnown RBP21.57■■□□□ 1.04
YBX3-202ENST00000279550 C17orf80Q9BSJ5 609 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 PRDM12Q9H4Q4 367 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 WDCPQ9H6R7 721 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 NMUR1Q9HB89 426 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 LZTS1Q9Y250 596 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 SSX2IPQ9Y2D8 614 aa21.57■■□□□ 1.04
YBX3-202ENST00000279550 A0A0A0MRY4 1105 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 HCAR3P49019 387 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 CREMQ03060 361 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 RAB33AQ14088 237 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 ANKRD20A2Q5SQ80 823 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 ANKRD20A1Q5TYW2 823 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 ANKRD20A3Q5VUR7 823 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 ARHGEF18Q6ZSZ5 1173 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 DENND5BQ6ZUT9 1274 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 BEND5Q7L4P6 421 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 TADA2BQ86TJ2 420 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 NUP93Q8N1F7 819 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 NPWQ8N729 165 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 P2RY11Q96G91 374 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 SPATA13Q96N96 652 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 CEP41Q9BYV8 373 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 UBE2OQ9C0C9 1292 aaKnown RBP21.56■■□□□ 1.04
YBX3-202ENST00000279550 FAM107BQ9H098 131 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 ACSS3Q9H6R3 686 aa21.56■■□□□ 1.04
YBX3-202ENST00000279550 ALG13Q9NP73 1137 aaKnown RBP21.56■■□□□ 1.04
YBX3-202ENST00000279550 INTS9Q9NV88 658 aaKnown RBP21.56■■□□□ 1.04
YBX3-202ENST00000279550 LAMA3Q16787 3333 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 C5orf67F2Z3F1 127 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 RNF103O00237 685 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 CA3P07451 260 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 BRAFP15056 766 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 TSHRP16473 764 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 PHBP35232 272 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 AP1B1Q10567 949 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 WASHC5Q12768 1159 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 EIF4EBP2Q13542 120 aaPredicted RBP21.55■■□□□ 1.04
YBX3-202ENST00000279550 SEMA5AQ13591 1074 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 PDK1Q15118 436 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 ARL13BQ3SXY8 428 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 BZW1Q7L1Q6 419 aaKnown RBP21.55■■□□□ 1.04
YBX3-202ENST00000279550 SPRED2Q7Z698 418 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 TRABD2AQ86V40 505 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 MCUQ8NE86 351 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 GDF15Q99988 308 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 PLAC1Q9HBJ0 212 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 RXFP1Q9HBX9 757 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 SLC24A2Q9UI40 661 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 PLXNA4Q9HCM2 1894 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 MYO16Q9Y6X6 1858 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 A0A1W2PQH9 124 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 TEX28O15482 410 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 TPSB2P20231 275 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 TPSAB1Q15661 275 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 QPCTQ16769 361 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 TMC7Q7Z402 723 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 MGARPQ8TDB4 240 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 CASP10Q92851 521 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 CFAP36Q96G28 342 aa21.55■■□□□ 1.04
YBX3-202ENST00000279550 SPATA17Q96L03 361 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms