RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 ZNF333Q96JL9 665 aa22.22■■□□□ 1.15
SH2D3A-201ENST00000245908 ZNF778Q96MU6 729 aa22.22■■□□□ 1.15
SH2D3A-201ENST00000245908 SLC2A13Q96QE2 648 aa22.22■■□□□ 1.15
SH2D3A-201ENST00000245908 SORCS3Q9UPU3 1222 aa22.22■■□□□ 1.15
SH2D3A-201ENST00000245908 BTBD19C9JJ37 291 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 NVLO15381 856 aaKnown RBP22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 NPR3P17342 541 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 LILRA4P59901 499 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 SLC34A1Q06495 639 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 SNX17Q15036 470 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 INSCQ1MX18 579 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 THEMIS2Q5TEJ8 643 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 TRIM68Q6AZZ1 485 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 WDR75Q8IWA0 830 aaKnown RBP22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 CCNYQ8ND76 341 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 FBXO27Q8NI29 283 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 PIWIL2Q8TC59 973 aaKnown RBP22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 PPP1R13LQ8WUF5 828 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 RILPQ96NA2 401 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 EBF4Q9BQW3 602 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 FAM167BQ9BTA0 163 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 STN1Q9H668 368 aaKnown RBP22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 NMRK1Q9NWW6 199 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 SEPT10Q9P0V9 454 aa22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 STX18Q9P2W9 335 aaKnown RBP22.21■■□□□ 1.15
SH2D3A-201ENST00000245908 M0QYT0 321 aa22.2■■□□□ 1.15
SH2D3A-201ENST00000245908 DCLK1O15075 740 aa22.2■■□□□ 1.15
SH2D3A-201ENST00000245908 ITM2AO43736 263 aa22.2■■□□□ 1.15
SH2D3A-201ENST00000245908 CREB3O43889 395 aa22.2■■□□□ 1.15
SH2D3A-201ENST00000245908 ALDH18A1P54886 795 aaKnown RBP22.2■■□□□ 1.15
SH2D3A-201ENST00000245908 RCN2Q14257 317 aa22.2■■□□□ 1.15
SH2D3A-201ENST00000245908 PCLAFQ15004 111 aa22.2■■□□□ 1.15
SH2D3A-201ENST00000245908 RASSF3Q86WH2 238 aa22.2■■□□□ 1.15
SH2D3A-201ENST00000245908 STMN2Q93045 179 aa22.2■■□□□ 1.15
SH2D3A-201ENST00000245908 WNT8BQ93098 351 aa22.2■■□□□ 1.15
SH2D3A-201ENST00000245908 PGBD4Q96DM1 585 aa22.2■■□□□ 1.15
SH2D3A-201ENST00000245908 EEF2KO00418 725 aaKnown RBP22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 CLDN5O00501 218 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 CAPN9O14815 690 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 BEST1O76090 585 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 EPHX2P34913 555 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 SLC1A6P48664 564 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 SESN3P58005 492 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 MRPS35P82673 323 aaKnown RBP22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 IFRD2Q12894 506 aaPredicted RBP22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 TUBB3Q13509 450 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 MUM1Q2TAK8 710 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 DNAL1Q4LDG9 190 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 MDH1BQ5I0G3 518 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 SPANXN3Q5MJ09 141 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 SNX30Q5VWJ9 437 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 BSPRYQ5W0U4 402 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 RFX8Q6ZV50 586 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 PAQR9Q6ZVX9 377 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 NME8Q8N427 588 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 MS4A4AQ96JQ5 239 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 DNAJC16Q9Y2G8 782 aa22.2■■□□□ 1.14
SH2D3A-201ENST00000245908 SYNJ2BP-COX16A0A087WUM0 186 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 PRR5-ARHGAP8B1AHC4 643 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 F8W8V4 182 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 LYPLA1O75608 230 aaPredicted RBP22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 ZNF189O75820 626 aaPredicted RBP22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 AP1G2O75843 785 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 PROCP04070 461 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 SERPINE1P05121 402 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 PRKCGP05129 697 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 POLBP06746 335 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 ARHGAP8P85298 464 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 DEUP1Q05D60 604 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 SYPL2Q5VXT5 272 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 CWF19L1Q69YN2 538 aaKnown RBP22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 ANO7Q6IWH7 933 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 LMNTD2Q8IXW0 634 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 DNAJB3Q8WWF6 145 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 NRG4Q8WWG1 115 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 FAM161BQ96MY7 647 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 C1orf21Q9H246 121 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 LRRC4Q9HBW1 653 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 PIGVQ9NUD9 493 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 COX16Q9P0S2 106 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 UNCXA6NJT0 531 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 TBX10O75333 385 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 TM7SF2O76062 418 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 PTPN1P18031 435 aaKnown RBP22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 AOC1P19801 751 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 GP5P40197 560 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 NDUFV1P49821 464 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 PDE1BQ01064 536 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 KDSRQ06136 332 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 THOC5Q13769 683 aaKnown RBP22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 HIC1Q14526 733 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 CLEC20AQ6ZU45 233 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 NET1Q7Z628 596 aaPredicted RBP22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 CERS2Q96G23 380 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 TSC22D3Q99576 134 aa22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.19■■□□□ 1.14
SH2D3A-201ENST00000245908 DYNC1LI2O43237 492 aaPredicted RBP22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 KCNA4P22459 653 aa22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 PAPOLAP51003 745 aaKnown RBP22.18■■□□□ 1.14
SH2D3A-201ENST00000245908 ADAM17P78536 824 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms