RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 PLA2G4CQ9UP65 541 aa14.78□□□□□ -0.04
HIF3A-202ENST00000244303 DNAJC16Q9Y2G8 782 aa14.78□□□□□ -0.04
HIF3A-202ENST00000244303 ZNF236Q9UL36 1845 aa14.78□□□□□ -0.04
HIF3A-202ENST00000244303 SMIM35A0A1B0GVV1 85 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 XPO1O14980 1071 aaKnown RBP14.77□□□□□ -0.04
HIF3A-202ENST00000244303 PLIN3O60664 434 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 ITGA2BP08514 1039 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 DARSP14868 501 aaKnown RBP14.77□□□□□ -0.04
HIF3A-202ENST00000244303 GLUD2P49448 558 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 SOX4Q06945 474 aaPredicted RBP14.77□□□□□ -0.04
HIF3A-202ENST00000244303 HIC1Q14526 733 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 PCLAFQ15004 111 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 DBN1Q16643 649 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 MORN1Q5T089 497 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 TEDDM1Q5T9Z0 273 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 CES3Q6UWW8 571 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 WDR75Q8IWA0 830 aaKnown RBP14.77□□□□□ -0.04
HIF3A-202ENST00000244303 TP53INP2Q8IXH6 220 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 ZNF567Q8N184 647 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 NME8Q8N427 588 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 PIWIL2Q8TC59 973 aaKnown RBP14.77□□□□□ -0.04
HIF3A-202ENST00000244303 PGBD4Q96DM1 585 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 CLPTM1LQ96KA5 538 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 RNF39Q9H2S5 420 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 PRDM12Q9H4Q4 367 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 PIN4Q9Y237 131 aaKnown RBP14.77□□□□□ -0.04
HIF3A-202ENST00000244303 SHROOM3Q8TF72 1996 aa14.77□□□□□ -0.04
HIF3A-202ENST00000244303 MBLAC1A4D2B0 266 aaPredicted RBP14.77□□□□□ -0.05
HIF3A-202ENST00000244303 CLDN5O00501 218 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 DAB1O75553 588 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 BEST1O76090 585 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 SLC1A6P48664 564 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 TAF6P49848 677 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 PDE1BQ01064 536 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 MAP2K5Q13163 448 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 OLIG2Q13516 323 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 MFSD10Q14728 455 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 OSTM1Q86WC4 334 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 RASSF3Q86WH2 238 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 SCUBE1Q8IWY4 988 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 B3GALNT2Q8NCR0 500 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 SCG3Q8WXD2 468 aaKnown RBP14.77□□□□□ -0.05
HIF3A-202ENST00000244303 ATP2A3Q93084 1043 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 LENG1Q96BZ8 264 aaPredicted RBP14.77□□□□□ -0.05
HIF3A-202ENST00000244303 PGLYRP2Q96PD5 576 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 FLRT1Q9NZU1 646 aa14.77□□□□□ -0.05
HIF3A-202ENST00000244303 M0QYT0 321 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 TM7SF2O76062 418 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 ATP5BP06576 529 aaKnown RBP14.76□□□□□ -0.05
HIF3A-202ENST00000244303 LINGO3P0C6S8 592 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 ERVK-10P10266 1014 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 GMPRP36959 345 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 MLH1P40692 756 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 NDUFV1P49821 464 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 NME3Q13232 169 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 TUBB3Q13509 450 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 PDK1Q15118 436 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 TBCCQ15814 346 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 PPM1JQ5JR12 505 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 OLFML2BQ68BL8 750 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 TLK2Q86UE8 772 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 CCNJLQ8IV13 435 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 PSTKQ8IV42 348 aaKnown RBP14.76□□□□□ -0.05
HIF3A-202ENST00000244303 TMEM40Q8WWA1 233 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 DNAJB3Q8WWF6 145 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 TNIP3Q96KP6 325 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 THTPAQ9BU02 230 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 DCDC2Q9UHG0 476 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 WASF2Q9Y6W5 498 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 A6NHS1 94 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 HUS1O60921 280 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 UPP2O95045 317 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 PRKCGP05129 697 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 ZNF865P0CJ78 1059 aaPredicted RBP14.76□□□□□ -0.05
HIF3A-202ENST00000244303 ACAT1P24752 427 aaKnown RBP14.76□□□□□ -0.05
HIF3A-202ENST00000244303 NOS2P35228 1153 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 PNPLA4P41247 253 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 MXRA7P84157 204 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 NAB1Q13506 487 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 SV2CQ496J9 727 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 SYPL2Q5VXT5 272 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 ATG14Q6ZNE5 492 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 ULK2Q8IYT8 1036 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 NT5C3BQ969T7 300 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 PANX3Q96QZ0 392 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 NPY6RQ99463 290 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 FERMT1Q9BQL6 677 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 DUSP16Q9BY84 665 aa14.76□□□□□ -0.05
HIF3A-202ENST00000244303 E2F8A0AVK6 867 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 MEI4A8MW99 385 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 POLBP06746 335 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 ERFP50548 548 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 IFRD2Q12894 506 aaPredicted RBP14.75□□□□□ -0.05
HIF3A-202ENST00000244303 DNAL1Q4LDG9 190 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 PID1Q7Z2X4 250 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 BNIPLQ7Z465 357 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 LIMS2Q7Z4I7 341 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 NET1Q7Z628 596 aaPredicted RBP14.75□□□□□ -0.05
HIF3A-202ENST00000244303 C10orf107Q8IVU9 208 aa14.75□□□□□ -0.05
HIF3A-202ENST00000244303 CERS2Q96G23 380 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms