RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 PGAM1P18669 254 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 NFKB1P19838 968 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 DUSP28Q4G0W2 176 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 CDCA2Q69YH5 1023 aaPredicted RBP13.92□□□□□ -0.18
RAB3D-201ENST00000222120 PDPK2PQ6A1A2 396 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 RAB44Q7Z6P3 723 aaPredicted RBP13.92□□□□□ -0.18
RAB3D-201ENST00000222120 TDRPQ86YL5 185 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 DDIASQ8IXT1 998 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 PIWIL2Q8TC59 973 aaKnown RBP13.92□□□□□ -0.18
RAB3D-201ENST00000222120 HSFY1Q96LI6 401 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 NUF2Q9BZD4 464 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 SAR1AQ9NR31 198 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 PLLPQ9Y342 182 aa13.92□□□□□ -0.18
RAB3D-201ENST00000222120 PRRC2BQ5JSZ5 2229 aaKnown RBP13.92□□□□□ -0.18
RAB3D-201ENST00000222120 ITGA2BP08514 1039 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 ZBTB48P10074 688 aaPredicted RBP13.91□□□□□ -0.18
RAB3D-201ENST00000222120 NAGLUP54802 743 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 NME5P56597 212 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 GTF3C2Q8WUA4 911 aaPredicted RBP13.91□□□□□ -0.18
RAB3D-201ENST00000222120 USP13Q92995 863 aaPredicted RBP13.91□□□□□ -0.18
RAB3D-201ENST00000222120 LRRC39Q96DD0 335 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 PHF21BQ96EK2 531 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 SEPT5Q99719 369 aaPredicted RBP13.91□□□□□ -0.18
RAB3D-201ENST00000222120 DTLQ9NZJ0 730 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 GMNNO75496 209 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 SERPINE1P05121 402 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 DARSP14868 501 aaKnown RBP13.91□□□□□ -0.18
RAB3D-201ENST00000222120 SERPINB8P50452 374 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 CSHL1Q14406 222 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 NOL9Q5SY16 702 aaKnown RBP13.91□□□□□ -0.18
RAB3D-201ENST00000222120 VWA5B1Q5TIE3 1220 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 SDHAF4Q5VUM1 108 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 RFWD3Q6PCD5 774 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 IZUMO2Q6UXV1 221 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 C10orf107Q8IVU9 208 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 CCDC117Q8IWD4 279 aaPredicted RBP13.91□□□□□ -0.18
RAB3D-201ENST00000222120 BBS5Q8N3I7 341 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 SPDYE1Q8NFV5 336 aaPredicted RBP13.91□□□□□ -0.18
RAB3D-201ENST00000222120 DCAKDQ8WVC6 231 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 SCG3Q8WXD2 468 aaKnown RBP13.91□□□□□ -0.18
RAB3D-201ENST00000222120 CERS2Q96G23 380 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 MARK4Q96L34 752 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 OMDQ99983 421 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 ZNF358Q9NW07 568 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 SCN9AQ15858 1988 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 BUD23O43709 281 aaKnown RBP13.91□□□□□ -0.18
RAB3D-201ENST00000222120 TADA2AO75478 443 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 ENPEPQ07075 957 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 SNX17Q15036 470 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 MGAT5BQ3V5L5 792 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 LRRC23Q53EV4 343 aaPredicted RBP13.91□□□□□ -0.18
RAB3D-201ENST00000222120 IFNEQ86WN2 208 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 IRAK4Q9NWZ3 460 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 IPPQ9Y573 584 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 PCDHA11Q9Y5I1 949 aa13.91□□□□□ -0.18
RAB3D-201ENST00000222120 MSX2P35548 267 aaPredicted RBP13.9□□□□□ -0.18
RAB3D-201ENST00000222120 PAPOLAP51003 745 aaKnown RBP13.9□□□□□ -0.18
RAB3D-201ENST00000222120 CLDN10P78369 228 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 MRPS5P82675 430 aaKnown RBP13.9□□□□□ -0.18
RAB3D-201ENST00000222120 ZNF235Q14590 738 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 PTAR1Q7Z6K3 402 aaPredicted RBP13.9□□□□□ -0.18
RAB3D-201ENST00000222120 TDRD5Q8NAT2 981 aaKnown RBP13.9□□□□□ -0.18
RAB3D-201ENST00000222120 ZMAT2Q96NC0 199 aaKnown RBP13.9□□□□□ -0.18
RAB3D-201ENST00000222120 BCO2Q9BYV7 579 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 TRPV6Q9H1D0 765 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 Q9H521 79 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 NT5MQ9NPB1 228 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.9□□□□□ -0.18
RAB3D-201ENST00000222120 GFAPP14136 432 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 BRCC3P46736 316 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 PARP6Q2NL67 630 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 PACS1Q6VY07 963 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 CCNJLQ8IV13 435 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 LRRC52Q8N7C0 313 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 BLOC1S5Q8TDH9 187 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 MFSD3Q96ES6 412 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 CATSPER2Q96P56 530 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 ARHGEF4Q9NR80 690 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 C10orf71Q711Q0 1435 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 ADAMTSL1Q8N6G6 1762 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 DNAJC6O75061 913 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 EFEMP1Q12805 493 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 PEX6Q13608 980 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 FSCN1Q16658 493 aaKnown RBP13.9□□□□□ -0.18
RAB3D-201ENST00000222120 WASHC2DQ5SRD0 308 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 SYPL2Q5VXT5 272 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 C10orf82Q8WW14 230 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 LRMDAQ9H2I8 198 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 ADAMTS5Q9UNA0 930 aa13.9□□□□□ -0.18
RAB3D-201ENST00000222120 SLC15A5A6NIM6 579 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 LGR5O75473 907 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 F9P00740 461 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 ODC1P11926 461 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 YWHAHQ04917 246 aaPredicted RBP13.9□□□□□ -0.19
RAB3D-201ENST00000222120 CTBP1Q13363 440 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 MAP7Q14244 749 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 UGP2Q16851 508 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 KHDC1Q4VXA5 237 aaKnown RBP13.9□□□□□ -0.19
RAB3D-201ENST00000222120 MFSD14CQ5VZR4 134 aa13.9□□□□□ -0.19
RAB3D-201ENST00000222120 ARFGAP1Q8N6T3 406 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms