RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 TUFMP49411 452 aaKnown RBP16.94■□□□□ 0.3
PHGDH-216ENST00000641375 MAGOHP61326 146 aaKnown RBP16.94■□□□□ 0.3
PHGDH-216ENST00000641375 CBLBQ13191 982 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 DNAJC21Q5F1R6 531 aaKnown RBP16.94■□□□□ 0.3
PHGDH-216ENST00000641375 FNBP1LQ5T0N5 605 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 CMTR2Q8IYT2 770 aaKnown RBP16.94■□□□□ 0.3
PHGDH-216ENST00000641375 TRIM43Q96BQ3 446 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-216ENST00000641375 SPATA13Q96N96 652 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 TMEM106CQ9BVX2 250 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 RC3H2Q9HBD1 1191 aaKnown RBP16.94■□□□□ 0.3
PHGDH-216ENST00000641375 ETNK1Q9HBU6 452 aa16.94■□□□□ 0.3
PHGDH-216ENST00000641375 MSI1O43347 362 aaKnown RBP16.93■□□□□ 0.3
PHGDH-216ENST00000641375 OPHN1O60890 802 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 PAGE1O75459 146 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 SOAT2O75908 522 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 BAIAP3O94812 1187 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 VAV1P15498 845 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 ATP5DP30049 168 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 HPDP32754 393 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-216ENST00000641375 OR1D2P34982 312 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 PHBP35232 272 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 SLCO1A2P46721 670 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 WDR5P61964 334 aaKnown RBP16.93■□□□□ 0.3
PHGDH-216ENST00000641375 BTG3Q14201 252 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-216ENST00000641375 FASTKD3Q14CZ7 662 aaKnown RBP16.93■□□□□ 0.3
PHGDH-216ENST00000641375 LONRF1Q17RB8 773 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 ANKRD20A2Q5SQ80 823 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 ANKRD20A1Q5TYW2 823 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 ANKRD20A3Q5VUR7 823 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 SRLQ86TD4 932 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 CCDC33Q8N5R6 958 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 ATP11CQ8NB49 1132 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 GPR152Q8TDT2 470 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 LRRN4Q8WUT4 740 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 P2RY11Q96G91 374 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 VN1R3Q9BXE9 311 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 CAPS2Q9BXY5 557 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 SIK2Q9H0K1 926 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 HSFX1Q9UBD0 423 aa16.93■□□□□ 0.3
PHGDH-216ENST00000641375 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.93■□□□□ 0.3
PHGDH-216ENST00000641375 KCNU1A8MYU2 1149 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 FGF10O15520 208 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-216ENST00000641375 APRTP07741 180 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 TSHRP16473 764 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 ATP2A2P16615 1042 aaKnown RBP16.92■□□□□ 0.3
PHGDH-216ENST00000641375 LAG3P18627 525 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 TPSB2P20231 275 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 FDFT1P37268 417 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 DEFB103AP81534 67 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 GAD2Q05329 585 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 TAF10Q12962 218 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 AUHQ13825 339 aaKnown RBP16.92■□□□□ 0.3
PHGDH-216ENST00000641375 TPSAB1Q15661 275 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 SKIDA1Q1XH10 827 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 C10orf67Q8IYJ2 551 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 MCUQ8NE86 351 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 CATSPERBQ9H7T0 1116 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 VPS37BQ9H9H4 285 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 PPCSQ9HAB8 311 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.92■□□□□ 0.3
PHGDH-216ENST00000641375 NUDT5Q9UKK9 219 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 E7EVH7 732 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 MTSS1O43312 755 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 CDH16O75309 829 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 SRGAP2BP0DMP2 458 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 HOXC13P31276 330 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 PPP2R2AP63151 447 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 NRG1Q02297 640 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-216ENST00000641375 PPIDQ08752 370 aaKnown RBP16.92■□□□□ 0.3
PHGDH-216ENST00000641375 SLC39A11Q8N1S5 342 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 RIBC1Q8N443 379 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-216ENST00000641375 HDAC11Q96DB2 347 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 SLC39A13Q96H72 371 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 FCRL2Q96LA5 508 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-216ENST00000641375 C1orf74Q96LT6 269 aa16.92■□□□□ 0.3
PHGDH-216ENST00000641375 ZMYND8Q9ULU4 1186 aaPredicted RBP16.92■□□□□ 0.3
PHGDH-216ENST00000641375 MKI67P46013 3256 aaKnown RBP16.92■□□□□ 0.3
PHGDH-216ENST00000641375 RNF103O00237 685 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 SHOX2O60902 331 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-216ENST00000641375 LBX1P52954 281 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 TBX4P57082 545 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 SARNPP82979 210 aaKnown RBP16.91■□□□□ 0.3
PHGDH-216ENST00000641375 DSG1Q02413 1049 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 SEMA5AQ13591 1074 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 BBS9Q3SYG4 887 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 MSS51Q4VC12 460 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 CCDC38Q502W7 563 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 TNFAIP8L3Q5GJ75 292 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 HP1BP3Q5SSJ5 553 aaPredicted RBP16.91■□□□□ 0.3
PHGDH-216ENST00000641375 TPGS2Q68CL5 300 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 RWDD4Q6NW29 188 aaKnown RBP16.91■□□□□ 0.3
PHGDH-216ENST00000641375 FAM117BQ6P1L5 589 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 TAOK1Q7L7X3 1001 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 CCDC13Q8IYE1 715 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 LZTR1Q8N653 840 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 FBXO36Q8NEA4 188 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 ZNF461Q8TAF7 563 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 TBC1D31Q96DN5 1066 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 TTLL2Q9BWV7 592 aa16.91■□□□□ 0.3
PHGDH-216ENST00000641375 AFF4Q9UHB7 1163 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms