RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 ZNF846Q147U1 533 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 FAM171A1Q5VUB5 890 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 TCEAL6Q6IPX3 200 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 STRA8Q7Z7C7 330 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 C4orf33Q8N1A6 199 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 HASPINQ8TF76 798 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 EEF1AKMT1Q8WVE0 214 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 ITCHQ96J02 903 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 REEP2Q9BRK0 252 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 GPAMQ9HCL2 828 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 TMCO1Q9UM00 188 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 LYVE1Q9Y5Y7 322 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 ZNF780BQ9Y6R6 833 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CNTNAP2Q9UHC6 1331 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 GON4LQ3T8J9 2241 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 MED24O75448 989 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 RPL4P36578 427 aaKnown RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 GPD2P43304 727 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 LRIG3Q6UXM1 1119 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 GALNT7Q86SF2 657 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 ERO1BQ86YB8 467 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 STK40Q8N2I9 435 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 UGT2B28Q9BY64 529 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 ROGDIQ9GZN7 287 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 MCCC2Q9HCC0 563 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 SLC35C2Q9NQQ7 365 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 UBE2QL1A1L167 161 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CASTOR2A6NHX0 329 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CCNDBP1O95273 360 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 NAMPTP43490 491 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 NME5P56597 212 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 PUDPQ08623 228 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 KPNB1Q14974 876 aaKnown RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 PTGISQ16647 500 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 GPAT3Q53EU6 434 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 KCNT1Q5JUK3 1230 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 MARC1Q5VT66 337 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 PYHIN1Q6K0P9 492 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 NEDD1Q8NHV4 660 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 FAM151AQ8WW52 585 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 SLC38A2Q96QD8 506 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 ALKBH4Q9NXW9 302 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 PRR12Q9ULL5 1215 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 TBX20Q9UMR3 447 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 AP4E1Q9UPM8 1137 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 DAGLAQ9Y4D2 1042 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CROCC2H7BZ55 1655 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CDK12Q9NYV4 1490 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 A0A0X1KG70 313 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 SLC28A1O00337 649 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 AKR1B1P15121 316 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CCNA2P20248 432 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 TPP2P29144 1249 aaPredicted RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 SERPINA4P29622 427 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 AP1S1P61966 158 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 EPS8Q12929 822 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CUL2Q13617 745 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 FAM46CQ5VWP2 391 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 TDRD5Q8NAT2 981 aaKnown RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 TESCQ96BS2 214 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 LRRC46Q96FV0 321 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 A1CFQ9NQ94 594 aaKnown RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 INTS10Q9NVR2 710 aaKnown RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 VANGL2Q9ULK5 521 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 TAF6LQ9Y6J9 622 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CASZ1Q86V15 1759 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 LCA5LO95447 670 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CYB5AP00167 134 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 EIF2S3P41091 472 aaKnown RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 OMPP47874 163 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 GALNT3Q14435 633 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 ZNF605Q86T29 641 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 ACOT1Q86TX2 421 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 GSPT2Q8IYD1 628 aaKnown RBP5.67□□□□□ -1.5
SCN1A-209ENST00000635750 DAW1Q8N136 415 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 SETD9Q8NE22 299 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 HCAR2Q8TDS4 363 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 SGF29Q96ES7 293 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 RIT2Q99578 217 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 FICDQ9BVA6 458 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CYP4F12Q9HCS2 524 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 TMEM138Q9NPI0 162 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CNGB3Q9NQW8 809 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 TAS2R13Q9NYV9 303 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CORO2BQ9UQ03 480 aa5.67□□□□□ -1.5
SCN1A-209ENST00000635750 CES2O00748 559 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 TPST1O60507 370 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 GIMD1P0DJR0 217 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 AKT2P31751 481 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 RPL3P39023 403 aaKnown RBP5.66□□□□□ -1.5
SCN1A-209ENST00000635750 STARP49675 285 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 ERFP50548 548 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 SNRPD1P62314 119 aaKnown RBP5.66□□□□□ -1.5
SCN1A-209ENST00000635750 ZNF543Q08ER8 600 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 PKN1Q16512 942 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 LYPLAL1Q5VWZ2 237 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 OVOS1Q6IE37 1185 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 ACAD10Q6JQN1 1059 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 CYB5R4Q7L1T6 521 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms