RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 TNFSF13BQ9Y275 285 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 PKP3Q9Y446 797 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 MRASO14807 208 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 SOX11P35716 441 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 LY6KQ17RY6 165 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 UNC93AQ86WB7 457 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 CERS2Q96G23 380 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 COPS7BQ9H9Q2 264 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 TRPC7Q9HCX4 862 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 FETUBQ9UGM5 382 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 EIF3LQ9Y262 564 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 A0A087X1B8 175 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 MAGEC1O60732 1142 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 MAFO75444 373 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 PIGNO95427 931 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 ACAT1P24752 427 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 MAP3K7CLP57077 242 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 PPIDQ08752 370 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 ADIGQ0VDE8 80 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 RNASEH2BQ5TBB1 312 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 DEFB106AQ8N104 65 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 OSCP1Q8WVF1 389 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 ACO2Q99798 780 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 TEX12Q9BXU0 123 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 MRPS26Q9BYN8 205 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 SPATC1LQ9H0A9 340 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 UMODL1Q5DID0 1318 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 MYO1GB0I1T2 1018 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 ZNF197O14709 1029 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 CYP1A1P04798 512 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 INSRRP14616 1297 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 MRPS22P82650 360 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 CAPSQ13938 189 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 UBAP2LQ14157 1087 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 GPR162Q16538 588 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 FUT11Q495W5 492 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 NBPF12Q5TAG4 269 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 PSTKQ8IV42 348 aaKnown RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 BHLHE22Q8NFJ8 381 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 IL22Q9GZX6 179 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 GPRC5DQ9NZD1 345 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 AJAP1Q9UKB5 411 aaPredicted RBP11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 RAD54BQ9Y620 910 aa11.16□□□□□ -0.62
CDC42EP3-206ENST00000611976 VPS26AO75436 327 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 ZBTB7AO95365 584 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 ERVK-10P10266 1014 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 CHRM3P20309 590 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 TM4SF1P30408 202 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 ETFBP38117 255 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 CXCL9Q07325 125 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 NOMO1Q15155 1222 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 AARS2Q5JTZ9 985 aaKnown RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 DCAF12L1Q5VU92 463 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 PTRHD1Q6GMV3 140 aaKnown RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 HORMAD1Q86X24 394 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 EFHBQ8N7U6 833 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 RDH11Q8TC12 318 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 FNIP1Q8TF40 1166 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 PRPF19Q9UMS4 504 aaKnown RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 PLLPQ9Y342 182 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 SAC3D1A6NKF1 404 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 WNT10BO00744 389 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 ERBB2P04626 1255 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 PGK2P07205 417 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 BPGMP07738 259 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 UBA1P22314 1058 aaKnown RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 SERPINB1P30740 379 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 MLH1P40692 756 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 RPL5P46777 297 aaKnown RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 EN1Q05925 392 aaPredicted RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 RNF219Q5W0B1 726 aaPredicted RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 SLC27A1Q6PCB7 646 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 CES3Q6UWW8 571 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 CHSY1Q86X52 802 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 RP9Q8TA86 221 aaKnown RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 BLOC1S5Q8TDH9 187 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 ASB2Q96Q27 587 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 KCTD14Q9BQ13 255 aaPredicted RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 DHX33Q9H6R0 707 aaKnown RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 PIH1D1Q9NWS0 290 aaKnown RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 BTBD7Q9P203 1132 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 EVPLLA8MZ36 301 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 ASMTLO95671 621 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 DEFA1P59665 94 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 DEFA3P59666 94 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 MMRN1Q13201 1228 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 POU6F1Q14863 301 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 ACBD5Q5T8D3 534 aaPredicted RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 CACHD1Q5VU97 1274 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 VSTM1Q6UX27 236 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 ZNF410Q86VK4 478 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 ZNF317Q96PQ6 595 aaPredicted RBP11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 LATS2Q9NRM7 1088 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 UBP1Q9NZI7 540 aa11.15□□□□□ -0.62
CDC42EP3-206ENST00000611976 A0A087WXM4 84 aa11.15□□□□□ -0.63
CDC42EP3-206ENST00000611976 RGSL1A5PLK6 1076 aa11.15□□□□□ -0.63
CDC42EP3-206ENST00000611976 C2orf81A6NN90 581 aa11.15□□□□□ -0.63
CDC42EP3-206ENST00000611976 DDX5P17844 614 aaKnown RBP11.15□□□□□ -0.63
CDC42EP3-206ENST00000611976 CDKN2BP42772 138 aa11.15□□□□□ -0.63
CDC42EP3-206ENST00000611976 CPT1AP50416 773 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms