RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 CAMTA2O94983 1202 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 OR6B1O95007 311 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 GH1P01241 217 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 CD3EP07766 207 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 DLDP09622 509 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 SNRPA1P09661 255 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 DHRS4L1P0CG22 281 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 PABPC1P11940 636 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 FCER1AP12319 257 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 ETS2P15036 469 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 UCHL3P15374 230 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TSHRP16473 764 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 PDE6AP16499 860 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF23P17027 643 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 ACAT1P24752 427 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 HMOX2P30519 316 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TTKP33981 857 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 MCM7P33993 719 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 PHBP35232 272 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TMED10P49755 219 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 NOP14P78316 857 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 PRR5P85299 388 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 FOLH1Q04609 750 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 PTK6Q13882 451 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 SIX1Q15475 284 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 NFIL3Q16649 462 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 MOGQ16653 247 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TXNRD1Q16881 649 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 LONRF1Q17RB8 773 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TMEM266Q2M3C6 531 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 MMEL1Q495T6 779 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 NADK2Q4G0N4 442 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 SFT2D3Q587I9 215 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 PLEKHG4Q58EX7 1191 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 HERC4Q5GLZ8 1057 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 RTP2Q5QGT7 225 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 DCAF12L1Q5VU92 463 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TDRD10Q5VZ19 366 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TTC27Q6P3X3 843 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCDC62Q6P9F0 684 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TTC23LQ6PF05 361 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCDC137Q6PK04 289 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 DCDC5Q6ZRR9 648 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 FRA10AC1Q70Z53 315 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 CATIPQ7Z7H3 387 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 DHDDSQ86SQ9 333 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 SLC13A5Q86YT5 568 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TICAM1Q8IUC6 712 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 RTKN2Q8IZC4 609 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 SCYL3Q8IZE3 742 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 REXO1Q8N1G1 1221 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 UBL4BQ8N7F7 174 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 VGLL2Q8N8G2 317 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCDC89Q8N998 374 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 ANKRD42Q8N9B4 389 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TERB1Q8NA31 727 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 ADCY4Q8NFM4 1077 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 OLIG1Q8TAK6 271 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 SLC35G2Q8TBE7 412 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 GIPC3Q8TF64 312 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 GRK7Q8WTQ7 553 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 CD101Q93033 1021 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 NKD1Q969G9 470 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 RNF34Q969K3 372 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 CALML4Q96GE6 196 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 DYDC2Q96IM9 177 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 PANX3Q96QZ0 392 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 DOK1Q99704 481 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 HEPHQ9BQS7 1158 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 MYL10Q9BUA6 226 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 LSM14BQ9BX40 385 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 SLC12A9Q9BXP2 914 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 SLC2A11Q9BYW1 496 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TANGO6Q9C0B7 1094 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCDC113Q9H0I3 377 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 NAPBQ9H115 298 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 CCDC68Q9H2F9 335 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TPK1Q9H3S4 243 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 ZNF287Q9HBT7 754 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRPC7Q9HCX4 862 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 ERVK-5Q9HDB9 667 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 PIH1D3Q9NQM4 214 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TBC1D23Q9NUY8 699 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 ARHGEF38Q9NXL2 777 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 RRN3Q9NYV6 651 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 NINJ2Q9NZG7 142 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 NTMQ9P121 344 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 HEY2Q9UBP5 337 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 SUCOQ9UBS9 1254 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TAGLN3Q9UI15 199 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 PTBP2Q9UKA9 531 aaKnown RBP4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 DENND2AQ9ULE3 1009 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 CARD8Q9Y2G2 431 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 IFT52Q9Y366 437 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 NEU2Q9Y3R4 380 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 TRIM17Q9Y577 477 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 SPO11Q9Y5K1 396 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 HCFC2Q9Y5Z7 792 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 ALG6Q9Y672 507 aa4.22□□□□□ -1.73
HMGB1P50-201ENST00000605814 MAD1L1Q9Y6D9 718 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms