RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 GJB6O95452 261 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 ADCY5O95622 1261 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 HOXB2P14652 356 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 FERP16591 822 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 TACR2P21452 398 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 CCR1P32246 355 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 GGCXP38435 758 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 IL12RB1P42701 662 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 CXCR3P49682 368 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 SULT1E1P49888 294 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 IRAK1P51617 712 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 ATXN1P54253 815 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 SIM2Q14190 667 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 NFKBIBQ15653 356 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 SLC25A52Q3SY17 297 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 RAB6CQ53S08 254 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 FSCBQ5H9T9 825 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 ARTNQ5T4W7 220 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 NUDT18Q6ZVK8 323 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 MON1BQ7L1V2 547 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 ARCQ7LC44 396 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 PHLDB2Q86SQ0 1253 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 CHSY1Q86X52 802 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 PHF13Q86YI8 300 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 CHPFQ8IZ52 775 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 LGI2Q8N0V4 545 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 DCLK2Q8N568 766 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 EMC1Q8N766 993 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 ATP6V0D2Q8N8Y2 350 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 HJURPQ8NCD3 748 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 JOSD2Q8TAC2 188 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 ERLEC1Q96DZ1 483 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 PGAP3Q96FM1 320 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 CFAP57Q96MR6 1250 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 TBCBQ99426 244 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 RAB6CQ9H0N0 254 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 METTL5Q9NRN9 209 aaKnown RBP11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 ABCB8Q9NUT2 735 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 ELOVL2Q9NXB9 296 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 STIM2Q9P246 746 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 THAP10Q9P2Z0 257 aaPredicted RBP11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 RAD54BQ9Y620 910 aa11.38□□□□□ -0.59
SHKBP1-206ENST00000595523 TCRBV5S1A1TA0A578 114 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 DCLK1O15075 740 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 PAGE1O75459 146 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 SLC2A3P11169 496 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 PABPC1P11940 636 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 GABRG2P18507 467 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 GBP1P32455 592 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 GSCP56915 257 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 LMAN2Q12907 356 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 ZNF234Q14588 700 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 EIF4HQ15056 248 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 PTPRNQ16849 979 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 FUT11Q495W5 492 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 FIGNQ5HY92 759 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 FBXL22Q6P050 247 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 PRR23BQ6ZRT6 265 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 CHST9Q7L1S5 443 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 TRMT11Q7Z4G4 463 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 KBTBD6Q86V97 674 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 CIR1Q86X95 450 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 FAM160A2Q8N612 972 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 MSANTD4Q8NCY6 345 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 FIBINQ8TAL6 211 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 HMGB4Q8WW32 186 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 RUBCNQ92622 972 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 DDX50Q9BQ39 737 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 POLMQ9NP87 494 aaPredicted RBP11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 TMPRSS4Q9NRS4 437 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 ARHGEF38Q9NXL2 777 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 RRN3Q9NYV6 651 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 TAS2R14Q9NYV8 317 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 AIPL1Q9NZN9 384 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 GGA2Q9UJY4 613 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 INTS6Q9UL03 887 aaKnown RBP11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 STAP1Q9ULZ2 295 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 HS3ST4Q9Y661 456 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 STON1Q9Y6Q2 735 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 CACNA1EQ15878 2313 aa11.37□□□□□ -0.59
SHKBP1-206ENST00000595523 C2CD4BA6NLJ0 364 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 GOLGA6L19H0YKK7 550 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 ENDOD1O94919 500 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 LUC7L3O95232 432 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 ABCB4P21439 1286 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 BCKDHBP21953 392 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 TGM1P22735 817 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 PRKCHP24723 683 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 PRKCIP41743 596 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 NSFP46459 744 aaKnown RBP11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 UBASH3AP57075 661 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 TPM4P67936 248 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 DEUP1Q05D60 604 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 PLK5Q496M5 336 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 CCDC14Q49A88 953 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 BRMS1LQ5PSV4 323 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 SH3PXD2AQ5TCZ1 1133 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 LAIR1Q6GTX8 287 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 LRSAM1Q6UWE0 723 aa11.36□□□□□ -0.59
SHKBP1-206ENST00000595523 CEP68Q76N32 757 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms