RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 ZNF397Q8NF99 534 aaPredicted RBP15.67■□□□□ 0.1
TRIM28-205ENST00000595028 NEK11Q8NG66 645 aa15.67■□□□□ 0.1
TRIM28-205ENST00000595028 WFIKKN2Q8TEU8 576 aa15.67■□□□□ 0.1
TRIM28-205ENST00000595028 SPACA7Q96KW9 195 aa15.67■□□□□ 0.1
TRIM28-205ENST00000595028 SPAG5Q96R06 1193 aa15.67■□□□□ 0.1
TRIM28-205ENST00000595028 NUCKS1Q9H1E3 243 aaKnown RBP15.67■□□□□ 0.1
TRIM28-205ENST00000595028 DUSP15Q9H1R2 295 aaPredicted RBP15.67■□□□□ 0.1
TRIM28-205ENST00000595028 ELOVL2Q9NXB9 296 aa15.67■□□□□ 0.1
TRIM28-205ENST00000595028 THAP10Q9P2Z0 257 aaPredicted RBP15.67■□□□□ 0.1
TRIM28-205ENST00000595028 XPO7Q9UIA9 1087 aaKnown RBP15.67■□□□□ 0.1
TRIM28-205ENST00000595028 RAD54BQ9Y620 910 aa15.67■□□□□ 0.1
TRIM28-205ENST00000595028 LAMA1P25391 3075 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 TYW5A2RUC4 315 aaKnown RBP15.66■□□□□ 0.1
TRIM28-205ENST00000595028 TBL1XO60907 577 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 MMEP08473 750 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 BCKDHBP21953 392 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 GBP1P32455 592 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 SCNN1AP37088 669 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 P2RY2P41231 377 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 IL12RB1P42701 662 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 GABRB2P47870 512 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 NOMO3P69849 1222 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 ENPP2Q13822 863 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 E2F5Q15329 346 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 MS4A13Q5J8X5 152 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 PMS2CLQ68D20 193 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 TMEM215Q68D42 235 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 KIAA1211LQ6NV74 962 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 DHX40Q8IX18 779 aaKnown RBP15.66■□□□□ 0.1
TRIM28-205ENST00000595028 ZNF557Q8N988 423 aaPredicted RBP15.66■□□□□ 0.1
TRIM28-205ENST00000595028 MSANTD4Q8NCY6 345 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 WFDC5Q8TCV5 224 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 SLC20A1Q8WUM9 679 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 MYEOVQ96EZ4 313 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 BTN2A3PQ96KV6 586 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 PCMTD1Q96MG8 357 aaPredicted RBP15.66■□□□□ 0.1
TRIM28-205ENST00000595028 FUCA2Q9BTY2 467 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 CIPCQ9C0C6 399 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 ABCB8Q9NUT2 735 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 DDIT4Q9NX09 232 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 CALCOCO1Q9P1Z2 691 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 GGA2Q9UJY4 613 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 INVSQ9Y283 1065 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 STON1Q9Y6Q2 735 aa15.66■□□□□ 0.1
TRIM28-205ENST00000595028 DSPP15924 2871 aaKnown RBP15.66■□□□□ 0.1
TRIM28-205ENST00000595028 RHOBTB1O94844 696 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 SLC2A3P11169 496 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 PABPC1P11940 636 aaKnown RBP15.65■□□□□ 0.1
TRIM28-205ENST00000595028 NDUFV2P19404 249 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 STAT1P42224 750 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 RPS24P62847 133 aaKnown RBP15.65■□□□□ 0.1
TRIM28-205ENST00000595028 CDR2Q01850 454 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 ZNF234Q14588 700 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 STARD3Q14849 445 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 MAP7D1Q3KQU3 841 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 OTUD1Q5VV17 481 aaPredicted RBP15.65■□□□□ 0.1
TRIM28-205ENST00000595028 NAA35Q5VZE5 725 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 IL31Q6EBC2 164 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 CHST9Q7L1S5 443 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 KIAA0907Q7Z7F0 614 aaPredicted RBP15.65■□□□□ 0.1
TRIM28-205ENST00000595028 CHSY1Q86X52 802 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 ERICH1Q86X53 443 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 XYLT1Q86Y38 959 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 MFN1Q8IWA4 741 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 AHI1Q8N157 1196 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 PGBD3Q8N328 593 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 RLN3Q8WXF3 142 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 SORCS1Q8WY21 1168 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 C18orf8Q96DM3 657 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.65■□□□□ 0.1
TRIM28-205ENST00000595028 PCDHGA5Q9Y5G8 931 aa15.65■□□□□ 0.1
TRIM28-205ENST00000595028 CEP192Q8TEP8 1941 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 SYNJ2BP-COX16A0A087WUM0 186 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 FAM170AA1A519 330 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 SMTNL1A8MU46 457 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 KCNU1A8MYU2 1149 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 WASH3PC4AMC7 463 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 TIMM44O43615 452 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 TACR2P21452 398 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 CCR1P32246 355 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 CD70P32970 193 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 NOS2P35228 1153 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 MATKP42679 507 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 ZNF165P49910 485 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 FMO1Q01740 532 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 FAM102AQ5T9C2 384 aaPredicted RBP15.64■□□□□ 0.09
TRIM28-205ENST00000595028 RAP1GAP2Q684P5 730 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 ADIPOR2Q86V24 386 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 LGI2Q8N0V4 545 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 ATP6V0D2Q8N8Y2 350 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 ERLEC1Q96DZ1 483 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 ARRDC1-AS1Q9H2J1 176 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 RRN3Q9NYV6 651 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 COX16Q9P0S2 106 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 STIM2Q9P246 746 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 NYNRINQ9P2P1 1898 aaKnown RBP15.64■□□□□ 0.09
TRIM28-205ENST00000595028 ZMIZ1Q9ULJ6 1067 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 STAP1Q9ULZ2 295 aa15.64■□□□□ 0.09
TRIM28-205ENST00000595028 GON4LQ3T8J9 2241 aa15.63■□□□□ 0.09
TRIM28-205ENST00000595028 SYCE3A1L190 88 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms