RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 EPCAMP16422 314 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 HOXC13P31276 330 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 ATP5OP48047 213 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 KPNA1P52294 538 aaPredicted RBP11.75□□□□□ -0.53
TUBD1-211ENST00000591548 NRLP54845 237 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 RBM10P98175 930 aaKnown RBP11.75□□□□□ -0.53
TUBD1-211ENST00000591548 NRG1Q02297 640 aaPredicted RBP11.75□□□□□ -0.53
TUBD1-211ENST00000591548 XRCC4Q13426 336 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 HLTFQ14527 1009 aaKnown RBP eCLIP11.75□□□□□ -0.53
TUBD1-211ENST00000591548 FAM153CQ494X1 144 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 MS4A13Q5J8X5 152 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 DARS2Q6PI48 645 aaKnown RBP11.75□□□□□ -0.53
TUBD1-211ENST00000591548 TMCO3Q6UWJ1 677 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 ZDHHC24Q6UX98 284 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 GAREM2Q75VX8 874 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 TP53INP2Q8IXH6 220 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 ZNF683Q8IZ20 524 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 NPWQ8N729 165 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 ATP6V0D2Q8N8Y2 350 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 FAM71DQ8N9W8 422 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 BTN2A3PQ96KV6 586 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 GDAP1L1Q96MZ0 367 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 SLC22A12Q96S37 553 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 NACA2Q9H009 215 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 MAN1C1Q9NR34 630 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 ASIC3Q9UHC3 531 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 FAM153AQ9UHL3 310 aa11.75□□□□□ -0.53
TUBD1-211ENST00000591548 BCLAF3A2AJT9 711 aaKnown RBP11.74□□□□□ -0.53
TUBD1-211ENST00000591548 E9PAM4 449 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 NRG2O14511 850 aaPredicted RBP11.74□□□□□ -0.53
TUBD1-211ENST00000591548 PER2O15055 1255 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 CCL16O15467 120 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 RFPL2O75678 378 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 IFNB1P01574 187 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 GABRR2P28476 465 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 RBL1P28749 1068 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 STIP1P31948 543 aaKnown RBP11.74□□□□□ -0.53
TUBD1-211ENST00000591548 HTR7P34969 479 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 ADCY8P40145 1251 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 VPS41P49754 854 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 AUHQ13825 339 aaKnown RBP11.74□□□□□ -0.53
TUBD1-211ENST00000591548 MAP9Q49MG5 647 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 PABPC1LQ4VXU2 614 aaKnown RBP11.74□□□□□ -0.53
TUBD1-211ENST00000591548 PPM1LQ5SGD2 360 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 FAM182AQ5T1J6 154 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 NUGGCQ68CJ6 796 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 TXNDC8Q6A555 127 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 PDE12Q6L8Q7 609 aaKnown RBP11.74□□□□□ -0.53
TUBD1-211ENST00000591548 RWDD4Q6NW29 188 aaKnown RBP11.74□□□□□ -0.53
TUBD1-211ENST00000591548 TNS4Q8IZW8 715 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 CCDC89Q8N998 374 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 FBXO25Q8TCJ0 367 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 RSAD2Q8WXG1 361 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.74□□□□□ -0.53
TUBD1-211ENST00000591548 ART4Q93070 314 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 CYP2S1Q96SQ9 504 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 PRMT1Q99873 361 aaKnown RBP11.74□□□□□ -0.53
TUBD1-211ENST00000591548 KLF16Q9BXK1 252 aaPredicted RBP11.74□□□□□ -0.53
TUBD1-211ENST00000591548 KLC2Q9H0B6 622 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 GKN1Q9NS71 199 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 SLC12A6Q9UHW9 1150 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 ANAPC1Q9H1A4 1944 aa11.74□□□□□ -0.53
TUBD1-211ENST00000591548 OBSL1O75147 1896 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 EPOPA6NHQ4 379 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 OLFM2O95897 454 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 KLKB1P03952 638 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 PLTPP55058 493 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 COG7P83436 770 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 CYP4F8P98187 520 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 SLC45A4Q5BKX6 768 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 PPP2R2DQ66LE6 453 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 NADSYN1Q6IA69 706 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 EMBQ6PCB8 327 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 RTL10Q7L3V2 364 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 ADGRD2Q7Z7M1 963 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 RBM23Q86U06 439 aaKnown RBP11.73□□□□□ -0.53
TUBD1-211ENST00000591548 ELMOD1Q8N336 334 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
TUBD1-211ENST00000591548 ARNTL2Q8WYA1 636 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 WBP2Q969T9 261 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 TBC1D31Q96DN5 1066 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 RTP4Q96DX8 246 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 SNF8Q96H20 258 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 ZFRQ96KR1 1074 aaKnown RBP11.73□□□□□ -0.53
TUBD1-211ENST00000591548 QKIQ96PU8 341 aaKnown RBP eCLIP11.73□□□□□ -0.53
TUBD1-211ENST00000591548 LGMNQ99538 433 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 CORO1BQ9BR76 489 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 ADAM7Q9H2U9 754 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 PCDH9Q9HC56 1237 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 HCFC1R1Q9NWW0 138 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 MPP6Q9NZW5 540 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 WHRNQ9P202 907 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 MSRAQ9UJ68 235 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 VANGL2Q9ULK5 521 aa11.73□□□□□ -0.53
TUBD1-211ENST00000591548 TNRC18O15417 2968 aaPredicted RBP11.73□□□□□ -0.53
TUBD1-211ENST00000591548 MTCL1Q9Y4B5 1905 aaKnown RBP11.73□□□□□ -0.53
TUBD1-211ENST00000591548 IGLV3-10A0A075B6K4 115 aa11.72□□□□□ -0.53
TUBD1-211ENST00000591548 GOLGA6L7A0A1B0GV03 622 aa11.72□□□□□ -0.53
TUBD1-211ENST00000591548 FGF10O15520 208 aaPredicted RBP11.72□□□□□ -0.53
TUBD1-211ENST00000591548 KCNN4O15554 427 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms