RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.74■□□□□ 0.59
NDEL1-217ENST00000583683 ING5Q8WYH8 240 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 AZIN2Q96A70 460 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 ZSWIM3Q96MP5 696 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 SLITRK6Q9H5Y7 841 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 SAE1Q9UBE0 346 aaPredicted RBP18.74■□□□□ 0.59
NDEL1-217ENST00000583683 E9PAM4 449 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 CTIFO43310 598 aaKnown RBP18.74■□□□□ 0.59
NDEL1-217ENST00000583683 GREM1O60565 184 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 EPHB2P29323 1055 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 AVPR1AP37288 418 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 SLC11A2P49281 568 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 CYP1B1Q16678 543 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 ACBD5Q5T8D3 534 aaPredicted RBP18.74■□□□□ 0.59
NDEL1-217ENST00000583683 RAP1GAP2Q684P5 730 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 ATG4AQ8WYN0 398 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 ANKRD7Q92527 254 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 SMG9Q9H0W8 520 aaKnown RBP18.74■□□□□ 0.59
NDEL1-217ENST00000583683 ETNK2Q9NVF9 386 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 ZMYM5Q9UJ78 669 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 AGO1Q9UL18 857 aaKnown RBP18.74■□□□□ 0.59
NDEL1-217ENST00000583683 VANGL2Q9ULK5 521 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 ARHGAP26Q9UNA1 814 aa18.74■□□□□ 0.59
NDEL1-217ENST00000583683 NUP210Q8TEM1 1887 aaPredicted RBP18.74■□□□□ 0.59
NDEL1-217ENST00000583683 GOLGA6L7A0A1B0GV03 622 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 APOC4-APOC2K7ER74 178 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 APOL1O14791 398 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 DAPK3O43293 454 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 ACSL4O60488 711 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 APOC2P02655 101 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 PECAM1P16284 738 aaPredicted RBP18.73■□□□□ 0.59
NDEL1-217ENST00000583683 HOXC13P31276 330 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 HTR7P34969 479 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 CBX2Q14781 532 aaPredicted RBP18.73■□□□□ 0.59
NDEL1-217ENST00000583683 COL19A1Q14993 1142 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 FAM133BQ5BKY9 247 aaKnown RBP18.73■□□□□ 0.59
NDEL1-217ENST00000583683 NCBP2-AS2Q69YL0 99 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 C1orf54Q8WWF1 131 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 HAUS1Q96CS2 278 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 FAM118BQ9BPY3 351 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 DDX47Q9H0S4 455 aaKnown RBP18.73■□□□□ 0.59
NDEL1-217ENST00000583683 ADAM7Q9H2U9 754 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 CLDND1Q9NY35 253 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 CCL26Q9Y258 94 aa18.73■□□□□ 0.59
NDEL1-217ENST00000583683 DCLK1O15075 740 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 PHF2O75151 1096 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 ERCC2P18074 760 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 SLC6A4P31645 630 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 LTBRP36941 435 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 RWDD4Q6NW29 188 aaKnown RBP18.72■□□□□ 0.59
NDEL1-217ENST00000583683 FBXL22Q6P050 247 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 C12orf50Q8NA57 414 aaPredicted RBP18.72■□□□□ 0.59
NDEL1-217ENST00000583683 USP13Q92995 863 aaPredicted RBP18.72■□□□□ 0.59
NDEL1-217ENST00000583683 TBC1D31Q96DN5 1066 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 S1PR5Q9H228 398 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 LRRC19Q9H756 370 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 PRDM16Q9HAZ2 1276 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 MFHAS1Q9Y4C4 1052 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 IGLV3-10A0A075B6K4 115 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 EFCAB8A8MWE9 144 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 ZFXP17010 805 aaPredicted RBP18.72■□□□□ 0.59
NDEL1-217ENST00000583683 TGM2P21980 687 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 FSHRP23945 695 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 OTUD4Q01804 1114 aaKnown RBP18.72■□□□□ 0.59
NDEL1-217ENST00000583683 CCNG2Q16589 344 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 ADGRF1Q5T601 910 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 NPNTQ6UXI9 565 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 Q6ZNB5 142 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 CHSY1Q86X52 802 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 KLHL7Q8IXQ5 586 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 MMGT1Q8N4V1 131 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 ACTL9Q8TC94 416 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 MAGOHBQ96A72 148 aaKnown RBP18.72■□□□□ 0.59
NDEL1-217ENST00000583683 KRT12Q99456 494 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 DCLK3Q9C098 648 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 TDP1Q9NUW8 608 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 STIM2Q9P246 746 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 CFAP97Q9P2B7 532 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 STOML2Q9UJZ1 356 aa18.72■□□□□ 0.59
NDEL1-217ENST00000583683 LEFTY2O00292 366 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 SCAMP3O14828 347 aaKnown RBP18.71■□□□□ 0.59
NDEL1-217ENST00000583683 PRAMEF12O95522 483 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 LATS1O95835 1130 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 TACR2P21452 398 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 GBE1Q04446 702 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 TTC27Q6P3X3 843 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 C1orf228Q6PIY5 440 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 LRRC31Q6UY01 552 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 HTR3DQ70Z44 454 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 NPAS3Q8IXF0 933 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 TTC13Q8NBP0 860 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 TTC16Q8NEE8 873 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 P3H4Q92791 437 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 IGSF8Q969P0 613 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 MYEOVQ96EZ4 313 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 GAS2L1Q99501 681 aaPredicted RBP18.71■□□□□ 0.59
NDEL1-217ENST00000583683 HOMER3Q9NSC5 361 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 PPARGC1AQ9UBK2 798 aaKnown RBP18.71■□□□□ 0.59
NDEL1-217ENST00000583683 HEY1Q9Y5J3 304 aa18.71■□□□□ 0.59
NDEL1-217ENST00000583683 NUP205Q92621 2012 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms