RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 JAM2P57087 298 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 POLR2FP61218 127 aaKnown RBP13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 RPS24P62847 133 aaKnown RBP13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 PITX1P78337 314 aaPredicted RBP13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 STARD3Q14849 445 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 SLC36A4Q6YBV0 504 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 CHST9Q7L1S5 443 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 LPCAT2Q7L5N7 544 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 APTXQ7Z2E3 356 aaKnown RBP13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 NOP9Q86U38 636 aaKnown RBP13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 ERICH1Q86X53 443 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 ATP6V0D2Q8N8Y2 350 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 NETO1Q8TDF5 533 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 NT5C3BQ969T7 300 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 C18orf8Q96DM3 657 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 PRICKLE1Q96MT3 831 aaPredicted RBP13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 ERGIC2Q96RQ1 377 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 BPIFA3Q9BQP9 254 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 NUCKS1Q9H1E3 243 aaKnown RBP13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 TMEM245Q9H330 911 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 SYNCQ9H7C4 482 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 FAM207AQ9NSI2 230 aaPredicted RBP13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 MBD1Q9UIS9 605 aaPredicted RBP13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 CDV3Q9UKY7 258 aaKnown RBP13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 PLA2G4CQ9UP65 541 aa13.1□□□□□ -0.31
LPCAT4-206ENST00000566581 SYNCRIPO60506 623 aaKnown RBP13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 DAB1O75553 588 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 GRAP2O75791 330 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 CAVIN2O95810 425 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 DLDP09622 509 aaKnown RBP13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 SOX5P35711 763 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 KLK7P49862 253 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 CREB5Q02930 508 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 ARID5AQ03989 594 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 FUT11Q495W5 492 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 ARCQ7LC44 396 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 MFN1Q8IWA4 741 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 FRMD1Q8N878 549 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 WFDC5Q8TCV5 224 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 SORCS1Q8WY21 1168 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 TTC17Q96AE7 1141 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 MYEOVQ96EZ4 313 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 PGAP3Q96FM1 320 aaPredicted RBP13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 PRMT1Q99873 361 aaKnown RBP13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 RTKNQ9BST9 563 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 DDIT4Q9NX09 232 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 XPO7Q9UIA9 1087 aaKnown RBP13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 NOCTQ9UK39 431 aaKnown RBP13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 RAD54BQ9Y620 910 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 CHD5Q8TDI0 1954 aa13.09□□□□□ -0.31
LPCAT4-206ENST00000566581 NYNRINQ9P2P1 1898 aaKnown RBP13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 IGHV1OR15-9A0A0B4J2B8 117 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 SLC30A4O14863 429 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 EPHB6O15197 1021 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 AP5Z1O43299 807 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 GFPT2O94808 682 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 MOCS2O96007 188 aaPredicted RBP13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 MMEP08473 750 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 POLR2EP19388 210 aaKnown RBP13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 ABCB4P21439 1286 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 TACR2P21452 398 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 CD70P32970 193 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 STAT1P42224 750 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 DPP6P42658 865 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 DHPSP49366 369 aaPredicted RBP13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 LIMK1P53667 647 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 ATXN1P54253 815 aaKnown RBP13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 NOMO3P69849 1222 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 CDR2Q01850 454 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 UBXN1Q04323 297 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 CAMK2GQ13555 558 aaPredicted RBP13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 SF3A2Q15428 464 aaKnown RBP13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 SYCP1Q15431 976 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 ANO6Q4KMQ2 910 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 TAF3Q5VWG9 929 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 MBLAC2Q68D91 279 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 SERPINA13PQ6UXR4 307 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 XYLT1Q86Y38 959 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 CCDC117Q8IWD4 279 aaPredicted RBP13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 LGI2Q8N0V4 545 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 C12orf50Q8NA57 414 aaPredicted RBP13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 MSANTD4Q8NCY6 345 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 NEK11Q8NG66 645 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 SPAG5Q96R06 1193 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 NPY6RQ99463 290 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 MKRN2Q9H000 416 aaKnown RBP13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 FAM204AQ9H8W3 233 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 FBRSQ9HAH7 460 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 PRDM16Q9HAZ2 1276 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 NLRC4Q9NPP4 1024 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 ITM2CQ9NQX7 267 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 STIM2Q9P246 746 aa13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 USP36Q9P275 1121 aaKnown RBP13.08□□□□□ -0.32
LPCAT4-206ENST00000566581 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.07□□□□□ -0.32
LPCAT4-206ENST00000566581 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.07□□□□□ -0.32
LPCAT4-206ENST00000566581 SMTNL1A8MU46 457 aa13.07□□□□□ -0.32
LPCAT4-206ENST00000566581 F5H5T6 163 aa13.07□□□□□ -0.32
LPCAT4-206ENST00000566581 M0QYT0 321 aa13.07□□□□□ -0.32
LPCAT4-206ENST00000566581 GDF9O60383 454 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms