RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TLDC1Q6P9B6 456 aa2.67□□□□□ -1.98
SMG1-212ENST00000566328 CREB3L2Q70SY1 520 aa2.67□□□□□ -1.98
SMG1-212ENST00000566328 LAS2Q8IYD9 372 aa2.67□□□□□ -1.98
SMG1-212ENST00000566328 KIAA0319LQ8IZA0 1049 aa2.67□□□□□ -1.98
SMG1-212ENST00000566328 CLEC18CQ8NCF0 446 aa2.67□□□□□ -1.98
SMG1-212ENST00000566328 GLMPQ8WWB7 406 aa2.67□□□□□ -1.98
SMG1-212ENST00000566328 INPP4AQ96PE3 977 aaPredicted RBP2.67□□□□□ -1.98
SMG1-212ENST00000566328 DUX5Q96PT3 197 aa2.67□□□□□ -1.98
SMG1-212ENST00000566328 FAM204AQ9H8W3 233 aa2.67□□□□□ -1.98
SMG1-212ENST00000566328 SPAG4Q9NPE6 437 aa2.67□□□□□ -1.98
SMG1-212ENST00000566328 TBC1D14Q9P2M4 693 aa2.67□□□□□ -1.98
SMG1-212ENST00000566328 L1RE1Q9UN81 338 aa2.67□□□□□ -1.98
SMG1-212ENST00000566328 G3BP2Q9UN86 482 aaKnown RBP2.67□□□□□ -1.98
SMG1-212ENST00000566328 A0A1B0GVT2 93 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 BECN2A8MW95 431 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 FOXO6A8MYZ6 492 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 INAFM1C9JVW0 142 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 SLC16A5O15375 505 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 KRT36O76013 467 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 DDNO94850 711 aaPredicted RBP2.66□□□□□ -1.98
SMG1-212ENST00000566328 NFATC1O95644 943 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 WNT1P04628 370 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 UMODP07911 640 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 FCGR1AP12314 374 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 SEC61A1P61619 476 aaKnown RBP2.66□□□□□ -1.98
SMG1-212ENST00000566328 KIF5AQ12840 1032 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 COASYQ13057 564 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 GPS2Q13227 327 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 KIAA1755Q5JYT7 1200 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 ASPHD1Q5U4P2 390 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 C9orf57Q5W0N0 161 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 FAM90A2PQ658T7 463 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 WBP2NLQ6ICG8 309 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 ACSM6Q6P461 480 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 SLC16A12Q6ZSM3 486 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 H1FNTQ75WM6 255 aaPredicted RBP2.66□□□□□ -1.98
SMG1-212ENST00000566328 RNF44Q7L0R7 432 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 C16orf82Q7Z2V1 217 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 CTU1Q7Z7A3 348 aaKnown RBP2.66□□□□□ -1.98
SMG1-212ENST00000566328 CLASRPQ8N2M8 674 aaKnown RBP2.66□□□□□ -1.98
SMG1-212ENST00000566328 GABPB2Q8TAK5 448 aaPredicted RBP2.66□□□□□ -1.98
SMG1-212ENST00000566328 RTP4Q96DX8 246 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 URB1-AS1Q96HZ7 61 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 WDR24Q96S15 920 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 EIF3CQ99613 913 aaKnown RBP2.66□□□□□ -1.98
SMG1-212ENST00000566328 RETREG1Q9H6L5 497 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 MAP6D1Q9H9H5 199 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 PRDM16Q9HAZ2 1276 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 ZBTB26Q9HCK0 441 aa2.66□□□□□ -1.98
SMG1-212ENST00000566328 HEYLQ9NQ87 328 aaPredicted RBP2.66□□□□□ -1.98
SMG1-212ENST00000566328 PLSCR5A0PG75 271 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 RGS14O43566 566 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 CBFA2T3O75081 653 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 COQ9O75208 318 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 ALDH1L1O75891 902 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 MT-ND5P03915 603 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 LCKP06239 509 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 RFPL3SP0C7P2 107 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 RPL17P18621 184 aaKnown RBP2.65□□□□□ -1.99
SMG1-212ENST00000566328 GPS1Q13098 491 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 CBFBQ13951 182 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 POLD3Q15054 466 aaPredicted RBP2.65□□□□□ -1.99
SMG1-212ENST00000566328 ZNF672Q499Z4 452 aaPredicted RBP2.65□□□□□ -1.99
SMG1-212ENST00000566328 FAM76BQ5HYJ3 339 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 TMEM196Q5HYL7 178 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 FNBP1LQ5T0N5 605 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 EPM2AIP1Q7L775 607 aaPredicted RBP2.65□□□□□ -1.99
SMG1-212ENST00000566328 TPH2Q8IWU9 490 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 CADM3Q8N126 398 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 SRFBP1Q8NEF9 429 aaKnown RBP2.65□□□□□ -1.99
SMG1-212ENST00000566328 OR52N4Q8NGI2 321 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 APIPQ96GX9 242 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 MSLNLQ96KJ4 702 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 SNX22Q96L94 193 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 ABHD14AQ9BUJ0 271 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 C1QTNF4Q9BXJ3 329 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 CATSPERBQ9H7T0 1116 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 TBC1D23Q9NUY8 699 aa2.65□□□□□ -1.99
SMG1-212ENST00000566328 SCN5AQ14524 2016 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 NOTCH3Q9UM47 2321 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 LOC102724159A0A0B4J2E5 919 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 ZSCAN9O15535 394 aaPredicted RBP2.64□□□□□ -1.99
SMG1-212ENST00000566328 MGEA5O60502 916 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 RFPL1O75677 317 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 IL18RAPO95256 599 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 ZBTB11O95625 1053 aaPredicted RBP2.64□□□□□ -1.99
SMG1-212ENST00000566328 PPP1R3DO95685 299 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 MYBP10242 640 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 MYF5P13349 255 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 TGM2P21980 687 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 ATICP31939 592 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 GSTM5P46439 218 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 CXCR3P49682 368 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 ZP1P60852 638 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 ABATP80404 500 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 PWP2Q15269 919 aaKnown RBP2.64□□□□□ -1.99
SMG1-212ENST00000566328 HLFQ16534 295 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 KRTAP24-1Q3LI83 254 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 ALG10Q5BKT4 473 aa2.64□□□□□ -1.99
SMG1-212ENST00000566328 ALG10BQ5I7T1 473 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms