RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 A0A1W2PQF6 199 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 SYNCRIPO60506 623 aaKnown RBP20.56■□□□□ 0.88
CMTM3-211ENST00000565922 SERPINC1P01008 464 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 ATP5BP06576 529 aaKnown RBP20.56■□□□□ 0.88
CMTM3-211ENST00000565922 TACR2P21452 398 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 NSFP46459 744 aaKnown RBP20.56■□□□□ 0.88
CMTM3-211ENST00000565922 SULT1E1P49888 294 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 RNASE9P60153 205 aaKnown RBP20.56■□□□□ 0.88
CMTM3-211ENST00000565922 NME3Q13232 169 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 ENPP2Q13822 863 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 BRMS1LQ5PSV4 323 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 RABGAP1LQ5R372 815 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 RAP1GAP2Q684P5 730 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 KIAA0907Q7Z7F0 614 aaPredicted RBP20.56■□□□□ 0.88
CMTM3-211ENST00000565922 KIAA2013Q8IYS2 634 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 LGI2Q8N0V4 545 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 FIBINQ8TAL6 211 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 PGAP3Q96FM1 320 aaPredicted RBP20.56■□□□□ 0.88
CMTM3-211ENST00000565922 NPY6RQ99463 290 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 USP18Q9UMW8 372 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 PLA2G4CQ9UP65 541 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 ABCA7Q8IZY2 2146 aa20.56■□□□□ 0.88
CMTM3-211ENST00000565922 GPR179Q6PRD1 2367 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 A0A1B0GTH6 734 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 GOLGA6L19H0YKK7 550 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 TEX33O43247 280 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 ZNF217O75362 1048 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 EPN2O95208 641 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 LUC7L3O95232 432 aaKnown RBP20.55■□□□□ 0.88
CMTM3-211ENST00000565922 GABRG2P18507 467 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 POLR2EP19388 210 aaKnown RBP20.55■□□□□ 0.88
CMTM3-211ENST00000565922 MMP8P22894 467 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 P2RY2P41231 377 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 IL12RB1P42701 662 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 RPS24P62847 133 aaKnown RBP20.55■□□□□ 0.88
CMTM3-211ENST00000565922 LMNB2Q03252 620 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 ZNF234Q14588 700 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 SLC25A52Q3SY17 297 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 ACBD5Q5T8D3 534 aaPredicted RBP20.55■□□□□ 0.88
CMTM3-211ENST00000565922 SERPINA13PQ6UXR4 307 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 CARNMT1Q8N4J0 409 aa20.55■□□□□ 0.88
CMTM3-211ENST00000565922 H0Y626 953 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 GOLGA8SH3BPF8 625 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 MOCS3O95396 460 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 CHRNB2P17787 502 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 OXCT1P55809 520 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 CENPCQ03188 943 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 DEUP1Q05D60 604 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 SPEM2Q0P670 501 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 PMS2CLQ68D20 193 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 TMEM215Q68D42 235 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 MBLAC2Q68D91 279 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 PPP1R2P3Q6NXS1 205 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 NT5C3BQ969T7 300 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 DUSP15Q9H1R2 295 aaPredicted RBP20.54■□□□□ 0.88
CMTM3-211ENST00000565922 WDCPQ9H6R7 721 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 CBX8Q9HC52 389 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 SEPT11Q9NVA2 429 aaKnown RBP20.54■□□□□ 0.88
CMTM3-211ENST00000565922 CALCOCO1Q9P1Z2 691 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 KIAA1522Q9P206 1035 aaPredicted RBP20.54■□□□□ 0.88
CMTM3-211ENST00000565922 XPO7Q9UIA9 1087 aaKnown RBP20.54■□□□□ 0.88
CMTM3-211ENST00000565922 TNRC6BQ9UPQ9 1833 aaKnown RBP20.54■□□□□ 0.88
CMTM3-211ENST00000565922 SDK1Q7Z5N4 2213 aa20.54■□□□□ 0.88
CMTM3-211ENST00000565922 NYNRINQ9P2P1 1898 aaKnown RBP20.54■□□□□ 0.88
CMTM3-211ENST00000565922 ZNF292O60281 2723 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 A0A1B0GVM2 712 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 TCAF2A6NFQ2 919 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 ASLP04424 464 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 CALB1P05937 261 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 DLDP09622 509 aaKnown RBP20.53■□□□□ 0.88
CMTM3-211ENST00000565922 UNGP13051 313 aaPredicted RBP20.53■□□□□ 0.88
CMTM3-211ENST00000565922 NDUFV2P19404 249 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 SLC12A1Q13621 1099 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 CSRP2Q16527 193 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 ZSCAN23Q3MJ62 389 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 SPDYCQ5MJ68 293 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 KIAA1211LQ6NV74 962 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 SLC36A4Q6YBV0 504 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 MMS22LQ6ZRQ5 1243 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 ADIPOR2Q86V24 386 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 CFAP52Q8N1V2 620 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 PPP1R9BQ96SB3 815 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 PRMT1Q99873 361 aaKnown RBP20.53■□□□□ 0.88
CMTM3-211ENST00000565922 C11orf70Q9BRQ4 267 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 CD248Q9HCU0 757 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 TMEM59LQ9UK28 342 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 RAD54BQ9Y620 910 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 DOCK4Q8N1I0 1966 aa20.53■□□□□ 0.88
CMTM3-211ENST00000565922 PRR5-ARHGAP8B1AHC4 643 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 WASH3PC4AMC7 463 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 DCLK1O15075 740 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 MAP3K13O43283 966 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 EPHX1P07099 455 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 SDHBP21912 280 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 CD70P32970 193 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 FLT3P36888 993 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 CXCR3P49682 368 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 GSCP56915 257 aaPredicted RBP20.52■□□□□ 0.88
CMTM3-211ENST00000565922 ARHGAP8P85298 464 aa20.52■□□□□ 0.88
CMTM3-211ENST00000565922 LMAN2Q12907 356 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms