RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 NECTIN4Q96NY8 510 aa15.26■□□□□ 0.03
CDH11-207ENST00000563255 PSMB7Q99436 277 aa15.26■□□□□ 0.03
CDH11-207ENST00000563255 ZNF670Q9BS34 389 aa15.26■□□□□ 0.03
CDH11-207ENST00000563255 PCDH18Q9HCL0 1135 aa15.26■□□□□ 0.03
CDH11-207ENST00000563255 TMPRSS4Q9NRS4 437 aa15.26■□□□□ 0.03
CDH11-207ENST00000563255 TDP1Q9NUW8 608 aa15.26■□□□□ 0.03
CDH11-207ENST00000563255 GPATCH2LQ9NWQ4 482 aa15.26■□□□□ 0.03
CDH11-207ENST00000563255 GDE1Q9NZC3 331 aa15.26■□□□□ 0.03
CDH11-207ENST00000563255 CDC23Q9UJX2 597 aa15.26■□□□□ 0.03
CDH11-207ENST00000563255 ZNF510Q9Y2H8 683 aa15.26■□□□□ 0.03
CDH11-207ENST00000563255 NUP205Q92621 2012 aa15.26■□□□□ 0.03
CDH11-207ENST00000563255 ZFHX2Q9C0A1 2572 aaPredicted RBP15.25■□□□□ 0.03
CDH11-207ENST00000563255 ACSL4O60488 711 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 GREM1O60565 184 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 SRGAP2O75044 1071 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 IL4RP24394 825 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 HTR7P34969 479 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 CDKN2BP42772 138 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 SLC11A2P49281 568 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 ZNF211Q13398 564 aaPredicted RBP15.25■□□□□ 0.03
CDH11-207ENST00000563255 DPYSL3Q14195 570 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 TFDP3Q5H9I0 405 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 MS4A13Q5J8X5 152 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 POTEHQ6S545 545 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 MFSD7Q6UXD7 560 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 HTR3DQ70Z44 454 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 CCDC50Q8IVM0 306 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 PYROXD2Q8N2H3 581 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 KIAA1958Q8N8K9 716 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 ACTRT1Q8TDG2 376 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 COG1Q8WTW3 980 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 ING5Q8WYH8 240 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 TSC1Q92574 1164 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 ACSF2Q96CM8 615 aaPredicted RBP15.25■□□□□ 0.03
CDH11-207ENST00000563255 FAF2Q96CS3 445 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 ZSWIM3Q96MP5 696 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 KCTD15Q96SI1 283 aaPredicted RBP15.25■□□□□ 0.03
CDH11-207ENST00000563255 MAGEB5Q9BZ81 275 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 POMKQ9H5K3 350 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 SLITRK6Q9H5Y7 841 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 KIF9Q9HAQ2 790 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 PRDM16Q9HAZ2 1276 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 KLHL11Q9NVR0 708 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 SMPD4Q9NXE4 827 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 OR12D3Q9UGF7 316 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 STOML2Q9UJZ1 356 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 HS3ST4Q9Y661 456 aa15.25■□□□□ 0.03
CDH11-207ENST00000563255 MYOFQ9NZM1 2061 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 E2F8A0AVK6 867 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 C2CD4DB7Z1M9 353 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 LEFTY2O00292 366 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 ZNF185O15231 689 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 CEP104O60308 925 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 GFRA3O60609 400 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 MOCS2O96007 188 aaPredicted RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 PDGFBP01127 241 aaPredicted RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 KLKB1P03952 638 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 CD48P09326 243 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 CORO1AP31146 461 aaKnown RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 ARL4AP40617 200 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 PPP6R3Q5H9R7 873 aaPredicted RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 PIK3R6Q5UE93 754 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 Q6ZNB5 142 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 CREG2Q8IUH2 290 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 ARID3BQ8IVW6 561 aaPredicted RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 NPAS3Q8IXF0 933 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 ZSCAN18Q8TBC5 510 aaPredicted RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 ATOH1Q92858 354 aaPredicted RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 FGF13Q92913 245 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 USP13Q92995 863 aaPredicted RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 EPAS1Q99814 870 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 PRMT1Q99873 361 aaKnown RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 CALN1Q9BXU9 219 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 OSBPL8Q9BZF1 889 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 RRAGDQ9NQL2 400 aaPredicted RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 CWC15Q9P013 229 aaKnown RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 XPO7Q9UIA9 1087 aaKnown RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 LSM7Q9UK45 103 aaKnown RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 CDH7Q9ULB5 785 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 SH3BP1Q9Y3L3 701 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 MRFAP1Q9Y605 127 aa15.24■□□□□ 0.03
CDH11-207ENST00000563255 ZFP37Q9Y6Q3 630 aaPredicted RBP15.24■□□□□ 0.03
CDH11-207ENST00000563255 hCG_1818297A0A087WSY0 165 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 H3BRJ5 948 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 IRF1P10914 325 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 PAFAH1B1P43034 410 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 C5orf22Q49AR2 442 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 ANKRD20A8PQ5CZ79 823 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 ADGRF1Q5T601 910 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 MANEALQ5VSG8 457 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 AADACL2Q6P093 401 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 GET4Q7L5D6 327 aaPredicted RBP15.23■□□□□ 0.03
CDH11-207ENST00000563255 ANKS1BQ7Z6G8 1248 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 DENND1CQ8IV53 801 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 FAM217AQ8IXS0 508 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 CELF5Q8N6W0 485 aaKnown RBP15.23■□□□□ 0.03
CDH11-207ENST00000563255 MAIP1Q8WWC4 291 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 WBP2Q969T9 261 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 ASB16Q96NS5 453 aa15.23■□□□□ 0.03
CDH11-207ENST00000563255 RNF157Q96PX1 679 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms