RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 EIF4EBP2Q13542 120 aaPredicted RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 EIF4HQ15056 248 aaKnown RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 CNGA2Q16280 664 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 ERCC6LQ2NKX8 1250 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 C2orf27AQ580R0 203 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 C10orf76Q5T2E6 689 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 BTBD8Q5XKL5 378 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 ANO7Q6IWH7 933 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 WDR93Q6P2C0 686 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 TMEM270Q6UE05 265 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 TOGARAM2Q6ZUX3 1019 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 CEP68Q76N32 757 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 DGLUCYQ7Z3D6 616 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 KIAA0907Q7Z7F0 614 aaPredicted RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 IRF2BP1Q8IU81 584 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 CCDC170Q8IYT3 715 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 SHC3Q92529 594 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 ZDHHC16Q969W1 377 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 PIWIL1Q96J94 861 aaKnown RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 HSFY1Q96LI6 401 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 HEXIM2Q96MH2 286 aaKnown RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 DNAJC7Q99615 494 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 BBS2Q9BXC9 721 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 SLC2A11Q9BYW1 496 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 TPSD1Q9BZJ3 242 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 ACBD3Q9H3P7 528 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 HAUS4Q9H6D7 363 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 VPS45Q9NRW7 570 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 RXFP3Q9NSD7 469 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 DNAJC17Q9NVM6 304 aaKnown RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 ZNF446Q9NWS9 450 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 MARCH2Q9P0N8 246 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 NUDT5Q9UKK9 219 aa7.18□□□□□ -1.26
SPG11-224ENST00000561268 AGO1Q9UL18 857 aaKnown RBP7.18□□□□□ -1.26
SPG11-224ENST00000561268 LRP4O75096 1905 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 LNP1A1A4G5 178 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 CTAGE9A4FU28 777 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 A6NNZ2 444 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 C10orf142B7Z368 130 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 DCLK1O15075 740 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 GDF9O60383 454 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 URI1O94763 535 aaPredicted RBP7.17□□□□□ -1.26
SPG11-224ENST00000561268 ALDH1A2O94788 518 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 RHOBTB1O94844 696 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 FBXO21O94952 628 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 AFPP02771 609 aaKnown RBP7.17□□□□□ -1.26
SPG11-224ENST00000561268 FYNP06241 537 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 ADRB1P08588 477 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 HOXB2P14652 356 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 NDUFV2P19404 249 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 BRD2P25440 801 aaKnown RBP7.17□□□□□ -1.26
SPG11-224ENST00000561268 GPD2P43304 727 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 DGKGP49619 791 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 SEC13P55735 322 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 SLC8A3P57103 927 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 GNG11P61952 73 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 KRT83P78385 493 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 EFEMP1Q12805 493 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 SF3A2Q15428 464 aaKnown RBP7.17□□□□□ -1.26
SPG11-224ENST00000561268 ANO4Q32M45 955 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 TUBB8Q3ZCM7 444 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 CCDC40Q4G0X9 1142 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 FAM133BQ5BKY9 247 aaKnown RBP7.17□□□□□ -1.26
SPG11-224ENST00000561268 PPP1R15BQ5SWA1 713 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 MPP7Q5T2T1 576 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 EMC10Q5UCC4 262 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 BSPRYQ5W0U4 402 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 KLHL10Q6JEL2 608 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 DPY19L2P1Q6NXN4 242 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 PMF1Q6P1K2 205 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 ENOSF1Q7L5Y1 443 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 METTL3Q86U44 580 aaKnown RBP7.17□□□□□ -1.26
SPG11-224ENST00000561268 FAM114A1Q8IWE2 563 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 PPM1KQ8N3J5 372 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 CCDC33Q8N5R6 958 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 TTC16Q8NEE8 873 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 STK32AQ8WU08 396 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 AZIN2Q96A70 460 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 SLC39A13Q96H72 371 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 LMLNQ96KR4 655 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 SPACA7Q96KW9 195 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 XPO6Q96QU8 1125 aaKnown RBP7.17□□□□□ -1.26
SPG11-224ENST00000561268 ACOX2Q99424 681 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 EDEM3Q9BZQ6 932 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 NACA2Q9H009 215 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 INTS2Q9H0H0 1204 aaKnown RBP7.17□□□□□ -1.26
SPG11-224ENST00000561268 ARRDC1-AS1Q9H2J1 176 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 LRRC4Q9HBW1 653 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 POLMQ9NP87 494 aaPredicted RBP7.17□□□□□ -1.26
SPG11-224ENST00000561268 SIX2Q9NPC8 291 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 MED4Q9NPJ6 270 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 ABCC13Q9NSE7 274 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 USP36Q9P275 1121 aaKnown RBP7.17□□□□□ -1.26
SPG11-224ENST00000561268 THAP10Q9P2Z0 257 aaPredicted RBP7.17□□□□□ -1.26
SPG11-224ENST00000561268 HESX1Q9UBX0 185 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 MBD1Q9UIS9 605 aaPredicted RBP7.17□□□□□ -1.26
SPG11-224ENST00000561268 RASAL2Q9UJF2 1139 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 STRIP2Q9ULQ0 834 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 USP24Q9UPU5 2620 aa7.17□□□□□ -1.26
SPG11-224ENST00000561268 MYLKQ15746 1914 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms