RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 MYO19Q96H55 970 aa14.67□□□□□ -0.06
SLIRP-210ENST00000557431 SLC6A18Q96N87 628 aa14.67□□□□□ -0.06
SLIRP-210ENST00000557431 IPO9Q96P70 1041 aaKnown RBP14.67□□□□□ -0.06
SLIRP-210ENST00000557431 UBXN6Q9BZV1 441 aa14.67□□□□□ -0.06
SLIRP-210ENST00000557431 BTBD1Q9H0C5 482 aa14.67□□□□□ -0.06
SLIRP-210ENST00000557431 EBF2Q9HAK2 575 aa14.67□□□□□ -0.06
SLIRP-210ENST00000557431 OLA1Q9NTK5 396 aaKnown RBP14.67□□□□□ -0.06
SLIRP-210ENST00000557431 HBS1LQ9Y450 684 aaKnown RBP14.67□□□□□ -0.06
SLIRP-210ENST00000557431 LOC400499M0QZD8 3231 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 TRIM49BA6NDI0 452 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 TRABD2BA6NFA1 517 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 MYL1P05976 194 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 EPB41P11171 864 aaKnown RBP14.66□□□□□ -0.06
SLIRP-210ENST00000557431 GTF2H1P32780 548 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 PMS1P54277 932 aaKnown RBP14.66□□□□□ -0.06
SLIRP-210ENST00000557431 PNOCQ13519 176 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 FAM133BQ5BKY9 247 aaKnown RBP14.66□□□□□ -0.06
SLIRP-210ENST00000557431 NADSYN1Q6IA69 706 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 ADAT2Q7Z6V5 191 aaKnown RBP14.66□□□□□ -0.06
SLIRP-210ENST00000557431 KIAA0907Q7Z7F0 614 aaPredicted RBP14.66□□□□□ -0.06
SLIRP-210ENST00000557431 AHI1Q8N157 1196 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 SIX6OS1Q8N1H7 587 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.66□□□□□ -0.06
SLIRP-210ENST00000557431 KAT5Q92993 513 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 PRICKLE1Q96MT3 831 aaPredicted RBP14.66□□□□□ -0.06
SLIRP-210ENST00000557431 ZSWIM1Q9BR11 485 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 DNAI2Q9GZS0 605 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 HESX1Q9UBX0 185 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 INTS6Q9UL03 887 aaKnown RBP14.66□□□□□ -0.06
SLIRP-210ENST00000557431 PLA2G4CQ9UP65 541 aa14.66□□□□□ -0.06
SLIRP-210ENST00000557431 O00370 1275 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 WNT9AO14904 365 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 TIMM44O43615 452 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 SIN3BO75182 1162 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 DKK1O94907 266 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 WNT1P04628 370 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 IGHV4-34P06331 123 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 DLDP09622 509 aaKnown RBP14.65□□□□□ -0.06
SLIRP-210ENST00000557431 POLR2EP19388 210 aaKnown RBP14.65□□□□□ -0.06
SLIRP-210ENST00000557431 BRD2P25440 801 aaKnown RBP14.65□□□□□ -0.06
SLIRP-210ENST00000557431 PRCPP42785 496 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 CTSOP43234 321 aaPredicted RBP14.65□□□□□ -0.06
SLIRP-210ENST00000557431 CTSKP43235 329 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 GRIA4P48058 902 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 CCT8P50990 548 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 SLC8A3P57103 927 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 RPS24P62847 133 aaKnown RBP14.65□□□□□ -0.06
SLIRP-210ENST00000557431 KRT85P78386 507 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 CAMK2BQ13554 666 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 TEAD4Q15561 434 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 ADGRF1Q5T601 910 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 PIK3R6Q5UE93 754 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 PMF1Q6P1K2 205 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 UBR7Q8N806 425 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 GANCQ8TET4 914 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 DCBLD2Q96PD2 775 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 CDC6Q99741 560 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 ABCC13Q9NSE7 274 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 KIAA1522Q9P206 1035 aaPredicted RBP14.65□□□□□ -0.06
SLIRP-210ENST00000557431 STOML2Q9UJZ1 356 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 PCDHGB2Q9Y5G2 931 aa14.65□□□□□ -0.06
SLIRP-210ENST00000557431 FAM237AA0A1B0GTK4 181 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 A0A1W2PP55 124 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 RNF225M0QZC1 329 aaPredicted RBP14.64□□□□□ -0.07
SLIRP-210ENST00000557431 CETN3O15182 167 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 MID1O15344 667 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 ZNF202O95125 648 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 ZIC2O95409 532 aaPredicted RBP14.64□□□□□ -0.07
SLIRP-210ENST00000557431 CD27P26842 260 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 ENPEPQ07075 957 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 DNAJC3Q13217 504 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 EDRF1Q3B7T1 1238 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 TTC31Q49AM3 519 aaPredicted RBP14.64□□□□□ -0.07
SLIRP-210ENST00000557431 PKDCCQ504Y2 493 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 FSCBQ5H9T9 825 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 ZNF776Q68DI1 518 aaPredicted RBP14.64□□□□□ -0.07
SLIRP-210ENST00000557431 KIAA0895LQ68EN5 471 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 NCEH1Q6PIU2 408 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 TMEM270Q6UE05 265 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 MFN1Q8IWA4 741 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 CFAP52Q8N1V2 620 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 CARNMT1Q8N4J0 409 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 ADAM32Q8TC27 787 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 LMLNQ96KR4 655 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 MIS12Q9H081 205 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 NUCKS1Q9H1E3 243 aaKnown RBP14.64□□□□□ -0.07
SLIRP-210ENST00000557431 PCED1AQ9H1Q7 454 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 FBXL12Q9NXK8 326 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 XPO7Q9UIA9 1087 aaKnown RBP14.64□□□□□ -0.07
SLIRP-210ENST00000557431 BPTFQ12830 3046 aa14.64□□□□□ -0.07
SLIRP-210ENST00000557431 TTC34A8MYJ7 566 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 M0QYV0 167 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 PLK4O00444 970 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 ACSL4O60488 711 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 MOCS2O96007 188 aaPredicted RBP14.63□□□□□ -0.07
SLIRP-210ENST00000557431 IGLV3-27P01718 113 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 VDRP11473 427 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 CSKP41240 450 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 GRK6P43250 576 aa14.63□□□□□ -0.07
SLIRP-210ENST00000557431 GALCP54803 685 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms